Enabling technology and core theory of synthetic biology

XE Zhang, C Liu, J Dai, Y Yuan, C Gao, Y Feng… - Science China Life …, 2023 - Springer
Synthetic biology provides a new paradigm for life science research (“build to learn”) and
opens the future journey of biotechnology (“build to use”). Here, we discuss advances of …

[HTML][HTML] Commercial proteases: present and future

Q Li, L Yi, P Marek, BL Iverson - FEBS letters, 2013 - Elsevier
This review presents a brief overview of the general categories of commercially used
proteases, and critically surveys the successful strategies currently being used to improve …

Phage-assisted continuous evolution of proteases with altered substrate specificity

MS Packer, HA Rees, DR Liu - Nature Communications, 2017 - nature.com
Here we perform phage-assisted continuous evolution (PACE) of TEV protease, which
canonically cleaves ENLYFQS, to cleave a very different target sequence, HPLVGHM, that is …

Engineering of TEV protease variants by yeast ER sequestration screening (YESS) of combinatorial libraries

L Yi, MC Gebhard, Q Li, JM Taft… - Proceedings of the …, 2013 - National Acad Sciences
Myriad new applications of proteases would be enabled by an ability to fine-tune substrate
specificity and activity. Herein we present a general strategy for engineering protease …

Biosensor-guided discovery and engineering of metabolic enzymes

HG Hwang, DY Ye, GY Jung - Biotechnology Advances, 2023 - Elsevier
A variety of chemicals have been produced through metabolic engineering approaches, and
enhancing biosynthesis performance can be achieved by using enzymes with high catalytic …

Phage-assisted evolution of botulinum neurotoxin proteases with reprogrammed specificity

TR Blum, H Liu, MS Packer, X Xiong, PG Lee, S Zhang… - Science, 2021 - science.org
Although bespoke, sequence-specific proteases have the potential to advance
biotechnology and medicine, generation of proteases with tailor-made cleavage specificities …

Peptides come round: using SICLOPPS libraries for early stage drug discovery

KR Lennard, A Tavassoli - Chemistry–A European Journal, 2014 - Wiley Online Library
Cyclic peptides are an emerging class of molecular therapeutics that are increasingly
viewed as ideal backbones for modulation of protein–protein interactions. A split‐intein …

Reporter‐based screening and selection of enzymes

T van Rossum, SWM Kengen… - The FEBS …, 2013 - Wiley Online Library
The biotech industry is continuously seeking for new or improved biocatalysts. The success
of these efforts is often hampered by the lack of an efficient screening assay. Thus, to be …

A tobacco etch virus protease with increased substrate tolerance at the P1'position

C Renicke, R Spadaccini, C Taxis - PloS one, 2013 - journals.plos.org
Site-specific proteases are important tools for in vitro and in vivo cleavage of proteins. They
are widely used for diverse applications, like protein purification, assessment of protein …

Simultaneous selection and counter‐selection for the directed evolution of proteases in E. coli using a cytoplasmic anchoring strategy

ZM Carrico, KL Strobel, ME Atreya… - Biotechnology and …, 2016 - Wiley Online Library
With the goal of generating new enzymes that can cleave custom sequences, this article
describes a selection strategy for evolving proteases with desirable characteristics. Positive …