The future of parentage analysis: From microsatellites to SNPs and beyond

SP Flanagan, AG Jones - Molecular ecology, 2019 - Wiley Online Library
Parentage analysis is a cornerstone of molecular ecology that has delivered fundamental
insights into behaviour, ecology and evolution. Microsatellite markers have long been the …

Development of a Medium Density Combined-Species SNP Array for Pacific and European Oysters (Crassostrea gigas and Ostrea edulis)

AP Gutierrez, F Turner, K Gharbi… - G3: Genes …, 2017 - academic.oup.com
SNP arrays are enabling tools for high-resolution studies of the genetic basis of complex
traits in farmed and wild animals. Oysters are of critical importance in many regions from …

Development of SNP panels as a new tool to assess the genetic diversity, population structure, and parentage analysis of the eastern oyster (Crassostrea virginica)

W Thongda, H Zhao, D Zhang, LN Jescovitch, M Liu… - Marine …, 2018 - Springer
Culture of the eastern oyster (Crassostrea virginica) is rapidly expanding. Combined with
their continuing role as an environmental sentinel species and ecological model, this trend …

SNP marker panels for parentage assignment and traceability in the Florida bass (Micropterus floridanus)

H Zhao, C Li, JS Hargrove, BR Bowen, W Thongda… - Aquaculture, 2018 - Elsevier
Abstract The Florida bass (Micropterus floridanus) is a species endemic to peninsular
Florida that is held in high esteem by bass anglers for its tendency to attain a larger …

QTL mapping for glycogen content and shell pigmentation in the Pacific oyster Crassostrea gigas using microsatellites and SNPs

X Zhong, Q Li, X Guo, H Yu, L Kong - Aquaculture international, 2014 - Springer
Glycogen content and shell pigmentation are two important economic traits of the Pacific
oyster Crassostrea gigas. The first set of quantitative trait loci (QTLs) controlling the two traits …

[HTML][HTML] A SNP parentage assignment panel for the silver lipped pearl oyster (Pinctada maxima)

C Massault, DB Jones, KR Zenger, JM Strugnell… - Aquaculture …, 2021 - Elsevier
The silver-lipped pearl oyster, Pinctada maxima, is an important aquaculture species
extensively farmed in tropical Australia and Southeast Asia to produce “South Sea” pearls …

An integrated genetic map based on EST-SNPs and QTL analysis of shell color traits in Pacific oyster Crassostrea gigas

J Wang, Q Li, X Zhong, J Song, L Kong, H Yu - Aquaculture, 2018 - Elsevier
Shell color polymorphism is common in nature for the marine mollusks. The Pacific oyster
Crassostrea gigas, is widely cultured and one of the most economically important bivalve …

[HTML][HTML] Development and validation of a SNP-based genotyping tool for pedigree establishment in Australian greenlip abalone Haliotis laevigata Donovan, 1808

PM Arbon, CNS Silva, DB Jones, D Jaccoud… - Aquaculture …, 2021 - Elsevier
To enable cumulative increases in aquaculture productivity, structured and efficient selective
breeding programs are required. These are contingent on the management of genetic …

Genome Structural Variation Landscape and Its Selection Signatures in the Fast-growing Strains of the Pacific Oyster, Crassostrea gigas

Z Jiao, Y Tian, B Hu, Q Li, S Liu - Marine Biotechnology, 2021 - Springer
Abstract The Pacific oyster (Crassostrea gigas) genome is highly polymorphic and affluent in
structural variations (SVs), a significant source of genetic variation underlying inter …

[PDF][PDF] 三疣梭子蟹生长相关SNP 位点的鉴定

张德宁, 吕建建, 刘萍, 冯艳艳, 高保全, 李健 - 中国水产科学, 2015 - aquaticjournal.com
为了发掘三疣梭子蟹(Portunus trituberculatus) 与生长相关的SNP, 本研究基于三疣梭子蟹比较
转录组学数据, 筛选出生长相关候选基因片段19 条, 利用该基因序列设计引物进行PCR 扩增 …