RNA molecules are important players in all domains of life and the study of the relationship
between their multiple flexible states and the associated biological roles has increased in …

A widening gap exists between the best practices for RNA secondary structure prediction
developed by computational researchers and the methods used in practice by …

The large-scale detection of putative intrinsic transcription terminators is limited to only a few
bacteria currently. We discovered a group of hairpins, called cluster hairpins, present within …

Obtaining valuable clues for noncoding RNA (ribonucleic acid) subsequences remains a
significant challenge, acknowledging that most of the human genome transcribes into …

The accurate “base pairing” in RNA molecules, which leads to the prediction of RNA
secondary structures, is crucial in order to explain unknown biological operations. Recently …

The observation and analysis of RNA molecules have proved crucial for the understanding
of various processes in nature. Scientists have mined knowledge and drawn conclusions …

Predicting the secondary structure of RNA sequences has been proved quite a challenging
research field for bioinformatics. Predicting structures that encapsulate the pseudoknot motif …

Accurately predicting the pairing order of bases in RNA molecules is essential for
anticipating RNA secondary structures. Consequently, this task holds significant importance …

Understanding the structural intricacies of RNA molecules is essential for deciphering
numerous biological processes. Traditionally, scientists have relied on experimental …

Understanding how RNA secondary structure prediction methods depend on the underlying
nearest-neighbor thermodynamic model remains a fundamental challenge in the field …