Integrating complex life cycles in comparative developmental biology

L Formery, CJ Lowe - Annual Review of Genetics, 2023 - annualreviews.org
The goal of comparative developmental biology is identifying mechanistic differences in
embryonic development between different taxa and how these evolutionary changes have …

Spiralian genomics and the evolution of animal genome architecture

IJY Liao, TM Lu, ME Chen, YJ Luo - Briefings in Functional …, 2023 - academic.oup.com
Recent developments in sequencing technologies have greatly improved our knowledge of
phylogenetic relationships and genomic architectures throughout the tree of life. Spiralia, a …

Molecular evidence of anteroposterior patterning in adult echinoderms

L Formery, P Peluso, I Kohnle, J Malnick, JR Thompson… - Nature, 2023 - nature.com
The origin of the pentaradial body plan of echinoderms from a bilateral ancestor is one of the
most enduring zoological puzzles,. Because echinoderms are defined by morphological …

Annelid comparative genomics and the evolution of massive lineage-specific genome rearrangement in bilaterians

TD Lewin, IJY Liao, YJ Luo - Molecular Biology and Evolution, 2024 - academic.oup.com
The organization of genomes into chromosomes is critical for processes such as genetic
recombination, environmental adaptation, and speciation. All animals with bilateral …

Chromosome-level genome assemblies of 2 hemichordates provide new insights into deuterostome origin and chromosome evolution

CY Lin, F Marlétaz, A Pérez-Posada… - PLoS …, 2024 - journals.plos.org
Deuterostomes are a monophyletic group of animals that includes Hemichordata,
Echinodermata (together called Ambulacraria), and Chordata. The diversity of deuterostome …

Analysis of the P. lividus sea urchin genome highlights contrasting trends of genomic and regulatory evolution in deuterostomes

F Marlétaz, A Couloux, J Poulain, K Labadie… - Cell Genomics, 2023 - cell.com
Sea urchins are emblematic models in developmental biology and display several
characteristics that set them apart from other deuterostomes. To uncover the genomic cues …

Single-cell atlases of two lophotrochozoan larvae highlight their complex evolutionary histories

L Piovani, DJ Leite, LA Yañez Guerra, F Simpson… - Science …, 2023 - science.org
Pelagic larval stages are widespread across animals, yet it is unclear whether larvae were
present in the last common ancestor of animals or whether they evolved multiple times due …

Hemichordate cis-regulatory genomics and the gene expression dynamics of deuterostomes

A Pérez-Posada, CY Lin, TP Fan, CY Lin… - Nature Ecology & …, 2024 - nature.com
Deuterostomes are one major group of bilaterians composed by hemichordates and
echinoderms (collectively called Ambulacraria) and chordates. Comparative studies …

Distinct genomic routes underlie transitions to specialised symbiotic lifestyles in deep-sea annelid worms

G Moggioli, B Panossian, Y Sun, D Thiel… - Nature …, 2023 - nature.com
Bacterial symbioses allow annelids to colonise extreme ecological niches, such as
hydrothermal vents and whale falls. Yet, the genetic principles sustaining these symbioses …

Fusion, fission, and scrambling of the bilaterian genome in Bryozoa

TD Lewin, IJY Liao, ME Chen, JDD Bishop… - Genome …, 2025 - genome.cshlp.org
Groups of orthologous genes are commonly found together on the same chromosome over
vast evolutionary distances. This extensive physical gene linkage, known as macrosynteny …