Genetics of multiple sclerosis: an overview and new directions

NA Patsopoulos - Cold Spring Harbor …, 2018 - perspectivesinmedicine.cshlp.org
The contribution of genetic inheritance in multiple sclerosis was established early on.
Although multiple sclerosis is not a Mendelian disease, its incidence and prevalence is …

Applications of deep learning in understanding gene regulation

Z Li, E Gao, J Zhou, W Han, X Xu, X Gao - Cell Reports Methods, 2023 - cell.com
Gene regulation is a central topic in cell biology. Advances in omics technologies and the
accumulation of omics data have provided better opportunities for gene regulation studies …

Single-nucleus chromatin accessibility and transcriptomic characterization of Alzheimer's disease

S Morabito, E Miyoshi, N Michael, S Shahin… - Nature …, 2021 - nature.com
The gene-regulatory landscape of the brain is highly dynamic in health and disease,
coordinating a menagerie of biological processes across distinct cell types. Here, we …

Multiple sclerosis genomic map implicates peripheral immune cells and microglia in susceptibility

International Multiple Sclerosis Genetics Consortium*†… - Science, 2019 - science.org
INTRODUCTION Multiple sclerosis (MS) is an inflammatory and degenerative disease of the
central nervous system (CNS) that often presents in young adults. Over the past decade …

A computational tool (H-MAGMA) for improved prediction of brain-disorder risk genes by incorporating brain chromatin interaction profiles

NYA Sey, B Hu, W Mah, H Fauni, JC McAfee… - Nature …, 2020 - nature.com
Most risk variants for brain disorders identified by genome-wide association studies reside in
the noncoding genome, which makes deciphering biological mechanisms difficult. A …

NF-κB subunits direct kinetically distinct transcriptional cascades in antigen receptor-activated B cells

M Zhao, P Chauhan, CA Sherman, A Singh… - Nature …, 2023 - nature.com
The nuclear factor kappa B (NF-κB) family of transcription factors orchestrates signal-
induced gene expression in diverse cell types. Cellular responses to NF-κB activation are …

DNA methylation as a mediator of HLA-DRB1*15:01 and a protective variant in multiple sclerosis

L Kular, Y Liu, S Ruhrmann, G Zheleznyakova… - Nature …, 2018 - nature.com
The human leukocyte antigen (HLA) haplotype DRB1* 15: 01 is the major risk factor for
multiple sclerosis (MS). Here, we find that DRB1* 15: 01 is hypomethylated and …

Coexpression network architecture reveals the brain-wide and multiregional basis of disease susceptibility

CL Hartl, G Ramaswami, WG Pembroke, S Muller… - Nature …, 2021 - nature.com
Gene networks have yielded numerous neurobiological insights, yet an integrated view
across brain regions is lacking. We leverage RNA sequencing in 864 samples representing …

Risk factors for multiple sclerosis in the context of Epstein-Barr virus infection

AK Hedström - Frontiers in Immunology, 2023 - frontiersin.org
Compelling evidence indicates that Epstein Barr virus (EBV) infection is a prerequisite for
multiple sclerosis (MS). The disease may arise from a complex interplay between latent EBV …

Development of autoantibodies precedes clinical manifestations of autoimmune diseases: a comprehensive review

WT Ma, C Chang, ME Gershwin, ZX Lian - Journal of autoimmunity, 2017 - Elsevier
The etiology of autoimmune diseases is due to a combination of genetic predisposition and
environmental factors that alter the expression of immune regulatory genes through various …