Challenges in analysis and interpretation of microsatellite data for population genetic studies

AI Putman, I Carbone - Ecology and evolution, 2014 - Wiley Online Library
Advancing technologies have facilitated the ever‐widening application of genetic markers
such as microsatellites into new systems and research questions in biology. In light of the …

Estimation of effective population sizes from data on genetic markers

J Wang - Philosophical Transactions of the Royal Society …, 2005 - royalsocietypublishing.org
The effective population size (N e) is an important parameter in ecology, evolutionary
biology and conservation biology. It is, however, notoriously difficult to estimate, mainly …

Mutational dynamics of microsatellites

A Bhargava, FF Fuentes - Molecular biotechnology, 2010 - Springer
Microsatellites are a ubiquitous class of simple repetitive DNA sequences, which are
widespread in both eukaryotic and prokaryotic genomes. The use of microsatellites as …

The timing of pigmentation lightening in Europeans

S Beleza, AM Santos, B McEvoy, I Alves… - Molecular biology …, 2013 - academic.oup.com
The inverse correlation between skin pigmentation and latitude observed in human
populations is thought to have been shaped by selective pressures favoring lighter skin to …

Proportioning whole-genome single-nucleotide–polymorphism diversity for the identification of geographic population structure and genetic ancestry

O Lao, K van Duijn, P Kersbergen, P de Knijff… - The American Journal of …, 2006 - cell.com
The identification of geographic population structure and genetic ancestry on the basis of a
minimal set of genetic markers is desirable for a wide range of applications in medical and …

Microsatellite variation and evolution of human lactase persistence

M Coelho, D Luiselli, G Bertorelle, AI Lopes, S Seixas… - Human genetics, 2005 - Springer
The levels of haplotype diversity within the lineages defined by two single-nucleotide
polymorphisms (SNPs)(− 13910 C/T and− 22018 G/A) associated with human lactase …

Genetic approaches for estimating the effective size of populations

P Leberg - The Journal of Wildlife Management, 2005 - Wiley Online Library
The effective population size (Ne) provides information on how fast genetic variation is being
lost, or relatedness is increasing, in a population of interest. This parameter is often …

Impacts of effective population size on genetic diversity in hatchery reared Brown trout (Salmo trutta L.) populations

T Aho, J Rönn, J Piironen, M Björklund - Aquaculture, 2006 - Elsevier
Many populations of brown trout are managed by hatchery breeding and supportive release.
Using a limited number of individuals as founders creates a bottleneck, which can lead to …

Mutation rate estimates for 110 Y-chromosome STRs combining population and father–son pair data

C Burgarella, M Navascués - European Journal of Human Genetics, 2011 - nature.com
Y-chromosome microsatellites (Y-STRs) are typically used for kinship analysis and forensic
identification, as well as for inferences on population history and evolution. All applications …

Large numbers of vertebrates began rapid population decline in the late 19th century

H Li, J Xiang-Yu, G Dai, Z Gu, C Ming… - Proceedings of the …, 2016 - National Acad Sciences
Accelerated losses of biodiversity are a hallmark of the current era. Large declines of
population size have been widely observed and currently 22,176 species are threatened by …