Partial least squares: a versatile tool for the analysis of high-dimensional genomic data

AL Boulesteix, K Strimmer - Briefings in bioinformatics, 2007 - academic.oup.com
Partial least squares (PLS) is an efficient statistical regression technique that is highly suited
for the analysis of genomic and proteomic data. In this article, we review both the theory …

Current metabolomics: technological advances

SP Putri, S Yamamoto, H Tsugawa… - Journal of bioscience and …, 2013 - Elsevier
Metabolomics, the global quantitative assessment of metabolites in a biological system, has
played a pivotal role in various fields of science in the post-genomic era. Metabolites are the …

Gut microbiota–bile acid–interleukin-22 axis orchestrates polycystic ovary syndrome

X Qi, C Yun, L Sun, J Xia, Q Wu, Y Wang, L Wang… - Nature medicine, 2019 - nature.com
Polycystic ovary syndrome (PCOS) is characterized by androgen excess, ovulatory
dysfunction and polycystic ovaries, and is often accompanied by insulin resistance. The …

Dysbiosis of maternal and neonatal microbiota associated with gestational diabetes mellitus

J Wang, J Zheng, W Shi, N Du, X Xu, Y Zhang, P Ji… - Gut, 2018 - gut.bmj.com
Objective The initial colonisation of the human microbiota and the impact of maternal health
on neonatal microbiota at birth remain largely unknown. The aim of our study is to …

Comparison of the variable importance in projection (VIP) and of the selectivity ratio (SR) methods for variable selection and interpretation

M Farrés, S Platikanov, S Tsakovski… - Journal of …, 2015 - Wiley Online Library
This study compares the application of two variable selection methods in partial least
squares regression (PLSR), the variable importance in projection (VIP) method and the …

Human intestinal lumen and mucosa-associated microbiota in patients with colorectal cancer

W Chen, F Liu, Z Ling, X Tong, C Xiang - PloS one, 2012 - journals.plos.org
Recent reports have suggested the involvement of gut microbiota in the progression of
colorectal cancer (CRC). We utilized pyrosequencing based analysis of 16S rRNA genes to …

Interactions between gut microbiota, host genetics and diet relevant to development of metabolic syndromes in mice

C Zhang, M Zhang, S Wang, R Han, Y Cao… - The ISME …, 2010 - academic.oup.com
Both genetic variations and diet-disrupted gut microbiota can predispose animals to
metabolic syndromes (MS). This study assessed the relative contributions of host genetics …

Composition of the gut microbiota modulates the severity of malaria

NF Villarino, GR LeCleir, JE Denny… - Proceedings of the …, 2016 - National Acad Sciences
Plasmodium infections result in clinical presentations that range from asymptomatic to
severe malaria, resulting in∼ 1 million deaths annually. Despite this toll on humanity, the …

OPLS discriminant analysis: combining the strengths of PLS‐DA and SIMCA classification

M Bylesjö, M Rantalainen, O Cloarec… - … of Chemometrics: A …, 2006 - Wiley Online Library
The characteristics of the OPLS method have been investigated for the purpose of
discriminant analysis (OPLS‐DA). We demonstrate how class‐orthogonal variation can be …

秦岭植被覆盖时空变化及其对气候变化与人类活动的双重响应

邓晨晖, 白红英, 高山, 刘荣娟, 马新萍, 黄晓月, 孟清 - 自然资源学报, 2018 - jnr.ac.cn
论文基于MODIS-NDVI 数据, DEM 及气象数据, 辅以趋势分析, 多元回归残差法,
偏最小二乘回归法, 反演了秦岭地区2000—2015 年植被覆盖度及分析了其“格局—过程—趋势” …