Genome, transcriptome and proteome: the rise of omics data and their integration in biomedical sciences

C Manzoni, DA Kia, J Vandrovcova… - Briefings in …, 2018 - academic.oup.com
Advances in the technologies and informatics used to generate and process large biological
data sets (omics data) are promoting a critical shift in the study of biomedical sciences. While …

Role of non-coding sequence variants in cancer

E Khurana, Y Fu, D Chakravarty, F Demichelis… - Nature Reviews …, 2016 - nature.com
Patients with cancer carry somatic sequence variants in their tumour in addition to the
germline variants in their inherited genome. Although variants in protein-coding regions …

Next-generation sequencing—an overview of the history, tools, and “Omic” applications

JK Kulski - Next generation sequencing-advances, applications …, 2016 - books.google.com
Next-generation sequencing (NGS) technologies using DNA, RNA, or methylation
sequencing have impacted enormously on the life sciences. NGS is the choice for large …

Detecting biothreat agents: From current diagnostics to developing sensor technologies

SA Walper, G Lasarte Aragonés, KE Sapsford… - ACS …, 2018 - ACS Publications
Although a fundamental understanding of the pathogenicity of most biothreat agents has
been elucidated and available treatments have increased substantially over the past …

Omics-based novel strategies in the diagnosis of endometriosis

M Samare-Najaf, SA Razavinasab… - Critical Reviews in …, 2024 - Taylor & Francis
Endometriosis, an enigmatic and chronic disorder, is considered a debilitating condition
despite being benign. Globally, this gynecologic disorder affects up to 10% of females of …

Radiogenomics–current status, challenges and future directions

CN Andreassen, LMH Schack, LV Laursen, J Alsner - Cancer letters, 2016 - Elsevier
Radiogenomics designates a scientific field that addresses possible associations between
genetic germline alterations and normal tissue toxicity after radiotherapy. The ultimate aim of …

Expression and functional analysis of CST1 in intractable nasal polyps

Y Kato, T Takabayashi, M Sakashita… - American journal of …, 2018 - atsjournals.org
In this study, we found Cystatin SN (CST1), a type 2 cystatin subfamily member, to be highly
expressed in nasal polyps from patients with intractable chronic rhinosinusitis (CRS) with …

Comprehensive performance comparison of high-resolution array platforms for genome-wide Copy Number Variation (CNV) analysis in humans

RR Haraksingh, A Abyzov, AE Urban - BMC genomics, 2017 - Springer
Background High-resolution microarray technology is routinely used in basic research and
clinical practice to efficiently detect copy number variants (CNVs) across the entire human …

A new haplotype block detection method for dense genome sequencing data based on interval graph modeling of clusters of highly correlated SNPs

SA Kim, CS Cho, SR Kim, SB Bull, YJ Yoo - Bioinformatics, 2018 - academic.oup.com
Motivation Linkage disequilibrium (LD) block construction is required for research in
population genetics and genetic epidemiology, including specification of sets of single …

understanding rare genetic diseases in low resource regions like Jammu and Kashmir–India

A Angural, A Spolia, A Mahajan, V Verma… - Frontiers in …, 2020 - frontiersin.org
Rare diseases (RDs) are the clinical conditions affecting a few percentage of individuals in a
general population compared to other diseases. Limited clinical information and a lack of …