[HTML][HTML] Regulatory role of microRNAs (miRNAs) in the recent development of abiotic stress tolerance of plants
Y Begum - Gene, 2022 - Elsevier
MicroRNAs (miRNAs) are a distinct groups of single-stranded non-coding, tiny regulatory
RNAs approximately 20–24 nucleotides in length. miRNAs negatively influence gene …
RNAs approximately 20–24 nucleotides in length. miRNAs negatively influence gene …
Biogenesis, functions, interactions, and resources of non-coding RNAs in plants
Plant transcriptomes encompass a large number of functional non-coding RNAs (ncRNAs),
only some of which have protein-coding capacity. Since their initial discovery, ncRNAs have …
only some of which have protein-coding capacity. Since their initial discovery, ncRNAs have …
An siRNA-guided ARGONAUTE protein directs RNA polymerase V to initiate DNA methylation
MJ Sigman, K Panda, R Kirchner, LL McLain, H Payne… - Nature Plants, 2021 - nature.com
In mammals and plants, cytosine DNA methylation is essential for the epigenetic repression
of transposable elements and foreign DNA. In plants, DNA methylation is guided by small …
of transposable elements and foreign DNA. In plants, DNA methylation is guided by small …
Reprogramming of RNA silencing triggered by cucumber mosaic virus infection in Arabidopsis
ML Annacondia, G Martinez - Genome Biology, 2021 - Springer
Background RNA silencing has an important role mediating sequence-specific virus
resistance in plants. The complex interaction of viruses with RNA silencing involves the …
resistance in plants. The complex interaction of viruses with RNA silencing involves the …
SARS-CoV-2-encoded MiRNAs inhibit host type I interferon pathway and mediate allelic differential expression of susceptible gene
Infection of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), causing the
rapid spread of coronavirus disease 2019 (COVID-19), has generated a public health crisis …
rapid spread of coronavirus disease 2019 (COVID-19), has generated a public health crisis …
Arabidopsis RNA Polymerase IV generates 21–22 nucleotide small RNAs that can participate in RNA-directed DNA methylation and may regulate genes
The plant-specific RNA Polymerase IV (Pol IV) transcribes heterochromatic regions,
including many transposable elements (TEs), with the well-described role of generating 24 …
including many transposable elements (TEs), with the well-described role of generating 24 …
Sorghum's whole-plant transcriptome and proteome responses to drought stress: A review
Sorghum is a cereal crop with key agronomic traits of drought and heat stress tolerance,
making it an ideal food and industrial commodity for hotter and more arid climates. These …
making it an ideal food and industrial commodity for hotter and more arid climates. These …
Parasitic plant small RNA analyses unveil parasite-specific signatures of microRNA retention, loss, and gain
Z Zangishei, ML Annacondia, H Gundlach… - Plant …, 2022 - academic.oup.com
Parasitism is a successful life strategy that has evolved independently in several families of
vascular plants. The genera Cuscuta and Orobanche represent examples of the two …
vascular plants. The genera Cuscuta and Orobanche represent examples of the two …
Small noncoding RNA discovery and profiling with sRNAtools based on high-throughput sequencing
Q Liu, C Ding, X Lang, G Guo, J Chen… - Briefings in …, 2021 - academic.oup.com
Abstract Small noncoding RNAs (sRNA/sncRNAs) are generated from different genomic loci
and play important roles in biological processes, such as cell proliferation and the regulation …
and play important roles in biological processes, such as cell proliferation and the regulation …
noisyR: enhancing biological signal in sequencing datasets by characterizing random technical noise
I Moutsopoulos, L Maischak, E Lauzikaite… - Nucleic Acids …, 2021 - academic.oup.com
High-throughput sequencing enables an unprecedented resolution in transcript
quantification, at the cost of magnifying the impact of technical noise. The consistent …
quantification, at the cost of magnifying the impact of technical noise. The consistent …