Chromatin accessibility profiling methods

L Minnoye, GK Marinov, T Krausgruber, L Pan… - Nature Reviews …, 2021 - nature.com
Chromatin accessibility, or the physical access to chromatinized DNA, is a widely studied
characteristic of the eukaryotic genome. As active regulatory DNA elements are generally …

Nucleosome structure and function

RK McGinty, S Tan - Chemical reviews, 2015 - ACS Publications
When fully extended, one copy of the three billion base pair human genome reaches a
length of over two meters. Yet, it must be packaged into the nucleus of a cell with an average …

Crystal structure of the nucleosome core particle at 2.8 Å resolution

K Luger, AW Mäder, RK Richmond, DF Sargent… - Nature, 1997 - nature.com
The X-ray crystal structure of the nucleosome core particle of chromatin shows in atomic
detail how the histone protein octamer is assembled and how 146 base pairs of DNA are …

A map of nucleosome positions in yeast at base-pair resolution

K Brogaard, L Xi, JP Wang, J Widom - Nature, 2012 - nature.com
The exact positions of nucleosomes along genomic DNA can influence many aspects of
chromosome function. However, existing methods for mapping nucleosomes do not provide …

Preparation of nucleosome core particle from recombinant histones

K Luger, TJ Rechsteiner, TJ Richmond - Methods in enzymology, 1999 - Elsevier
Publisher Summary This chapter describes the preparation method of nucleosome core
particles (NCPs) from recombinant histones. The ability to make defined NCPs, or arrays of …

Expression and purification of recombinant histones and nucleosome reconstitution

K Luger, TJ Rechsteiner, TJ Richmond - Chromatin Protocols, 1999 - Springer
In vitro studies on nucleosome core particles (NCPs) and nucleosomes have generally been
limited to the use of histone proteins isolated from chromatin. Numerous reliable and well …

Chromatin fiber folding: requirement for the histone H4 N-terminal tail

B Dorigo, T Schalch, K Bystricky… - Journal of molecular …, 2003 - Elsevier
We have developed a self-assembly system for nucleosome arrays in which recombinant,
post-translationally unmodified histone proteins are combined with DNA of defined …

Characterization of nucleosome core particles containing histone proteins made in bacteria

K Luger, TJ Rechsteiner, AJ Flaus, MMY Waye… - Journal of molecular …, 1997 - Elsevier
The four core histone proteins, H2A, H2B, H3, and H4 of Xenopus laevis have been
individually expressed in milligram quantities in Escherichia coli. The full-length proteins …

Chromatin disruption and modification

AP Wolffe, JJ Hayes - Nucleic acids research, 1999 - academic.oup.com
Chromatin disruption and modification are associated with transcriptional regulation by
diverse coactivators and corepressors. Here we discuss the possible structural basis and …

Histones: at the crossroads of peptide and protein chemistry

MM Müller, TW Muir - Chemical reviews, 2015 - ACS Publications
1. INTRODUCTION In eukaryotic cells, inheritable information is stored in a nucleoprotein
complex referred to as chromatin. 1 This genome architecture serves two key purposes. On …