Viruses of archaea: structural, functional, environmental and evolutionary genomics

M Krupovic, V Cvirkaite-Krupovic, J Iranzo… - Virus research, 2018 - Elsevier
Viruses of archaea represent one of the most enigmatic parts of the virosphere. Most of the
characterized archaeal viruses infect extremophilic hosts and display remarkable diversity of …

The wonderful world of archaeal viruses

D Prangishvili - Annual review of microbiology, 2013 - annualreviews.org
This review presents a personal account of research on archaeal viruses and describes
many new viral species and families, demonstrating that viruses of Archaea constitute a …

Archaeal viruses: diversity, replication, and structure

N Dellas, JC Snyder, B Bolduc… - Annual Review of …, 2014 - annualreviews.org
The Archaea—and their viruses—remain the most enigmatic of life's three domains. Once
thought to inhabit only extreme environments, archaea are now known to inhabit diverse …

Evolution of regulated transcription

OV Bylino, AN Ibragimov, YV Shidlovskii - Cells, 2020 - mdpi.com
The genomes of all organisms abound with various cis-regulatory elements, which control
gene activity. Transcriptional enhancers are a key group of such elements in eukaryotes and …

Structural insights into the modulatory role of the accessory protein WYL1 in the type VI-D CRISPR-Cas system

H Zhang, C Dong, L Li, GA Wasney… - Nucleic acids …, 2019 - academic.oup.com
Abstract The Type VI-D CRISPR-Cas system employs an RNA-guided RNase Cas13d with
minimal targeting constraints to combat viral infections. This CRISPR system contains …

Cis-regulatory logic in archaeal transcription

E Peeters, N Peixeiro, G Sezonov - Biochemical Society …, 2013 - portlandpress.com
For cellular fitness and survival, gene expression levels need to be regulated in response to
a wealth of cellular and environmental signals. TFs (transcription factors) execute a large …

The interaction between the F55 virus-encoded transcription regulator and the RadA host recombinase reveals a common strategy in Archaea and Bacteria to sense …

S Fusco, M Aulitto, I Iacobucci, G Crocamo… - … et Biophysica Acta (BBA …, 2020 - Elsevier
Sulfolobus spindle-shaped virus 1 is the only UV-inducible member of the virus family
Fuselloviridae. Originally isolated from Saccharolobus shibatae B12, it can also infect …

Repression of RNA polymerase by the archaeo-viral regulator ORF145/RIP

C Sheppard, F Blombach, A Belsom, S Schulz… - Nature …, 2016 - nature.com
Little is known about how archaeal viruses perturb the transcription machinery of their hosts.
Here we provide the first example of an archaeo-viral transcription factor that directly targets …

Chromatin and gene regulation in archaea

F Blombach, F Werner - Molecular Microbiology, 2024 - Wiley Online Library
The chromatinisation of DNA by nucleoid‐associated proteins (NAPs) in archaea 'formats'
the genome structure in profound ways, revealing both striking differences and analogies to …

Transcription regulation in the third domain

EA Karr - Advances in applied microbiology, 2014 - Elsevier
The ability of organisms to sense and respond to their environment is essential to their
survival. This is no different for members of the third domain of life, the Archaea. Archaea are …