Multiple binding modes of inhibitors to carbonic anhydrases: how to design specific drugs targeting 15 different isoforms?

V Alterio, A Di Fiore, K D'Ambrosio, CT Supuran… - Chemical …, 2012 - ACS Publications
Carbonic anhydrases (CAs, EC 4.2. 1.1) are ubiquitous metallo-enzymes, present
throughout most living organisms and encoded by five evolutionarily unrelated gene …

Approaches to the description and prediction of the binding affinity of small‐molecule ligands to macromolecular receptors

H Gohlke, G Klebe - Angewandte Chemie International Edition, 2002 - Wiley Online Library
The influence of a xenobiotic compound on an organism is usually summarized by the
expression biological activity. If a controlled, therapeutically relevant, and regulatory action …

DOCK 6: Impact of new features and current docking performance

WJ Allen, TE Balius, S Mukherjee… - Journal of …, 2015 - Wiley Online Library
This manuscript presents the latest algorithmic and methodological developments to the
structure‐based design program DOCK 6.7 focused on an updated internal energy function …

Carbonic anhydrase as a model for biophysical and physical-organic studies of proteins and protein− ligand binding

VM Krishnamurthy, GK Kaufman, AR Urbach… - Chemical …, 2008 - ACS Publications
Carbonic anhydrase (CA, EC 4.2. 1.1) is a protein that is especially well-suited to serve as a
model in many types of studies in biophysics, bioanalysis, the physical-organic chemistry of …

Unexpected nanomolar inhibition of carbonic anhydrase by COX-2-selective celecoxib: new pharmacological opportunities due to related binding site recognition

A Weber, A Casini, A Heine, D Kuhn… - Journal of medicinal …, 2004 - ACS Publications
By optimizing binding to a selected target protein, modern drug research strives to develop
safe and efficacious agents for the treatment of disease. Selective drug action is intended to …

Crystal structure of the dimeric extracellular domain of human carbonic anhydrase XII, a bitopic membrane protein overexpressed in certain cancer tumor cells

DA Whittington, A Waheed… - Proceedings of the …, 2001 - National Acad Sciences
Overexpression of the zinc enzyme carbonic anhydrase (CA; EC 4.2. 1.1) XII is observed in
certain human cancers. This bitopic membrane protein contains an N-terminal extracellular …

Pharmacological and ocular hypotensive properties of topical carbonic anhydrase inhibitors

MF Sugrue - Progress in retinal and eye research, 2000 - Elsevier
There was a time gap of over 40 years between the demonstrated oral effectiveness of
acetazolamide in lowering the intraocular pressure (IOP) of glaucoma patients and the …

Environment-sensitive fluorescent turn-on probes targeting hydrophobic ligand-binding domains for selective protein detection.

YD Zhuang, PY Chiang, CW Wang… - Angewandte …, 2013 - search.ebscohost.com
Protein-specific detection or imaging is important in medical diagnosis to detect protein
biomarkers, as well as in biology to investigate cellular processes. Small-molecule …

Small molecule growth 2001 (SMoG2001): An improved knowledge-based scoring function for protein− ligand interactions

AV Ishchenko, EI Shakhnovich - Journal of medicinal chemistry, 2002 - ACS Publications
Computational lead design procedures require fast and accurate scoring functions to rank
millions of generated virtual ligands for protein targets. In this article, we present an …

Continued exploration of 1, 2, 4-oxadiazole periphery for carbonic anhydrase-targeting primary arene sulfonamides: Discovery of subnanomolar inhibitors of …

M Krasavin, A Shetnev, T Sharonova, S Baykov… - European Journal of …, 2019 - Elsevier
An expanded set of diversely substituted 1, 2, 4-oxadiazole-containing primary aromatic
sulfonamides was synthesized and tested for inhibition of human carbonic anhydrase I, II, IX …