Emerging importance of bighead catfish (Clarias macrocephalus) and north African catfish (C. gariepinus) as a bioresource and their genomic perspective

A Lisachov, DHM Nguyen, T Panthum, SF Ahmad… - Aquaculture, 2023 - Elsevier
Catfish make up a large group of widely distributed freshwater fish. Clariid catfish (Clariidae)
are the most widespread freshwater fish species in Africa and Asia. They are adaptable and …

Aquaculture omics: An update on the current status of research and data analysis

JK Sundaray, S Dixit, A Rather, KD Rasal, L Sahoo - Marine Genomics, 2022 - Elsevier
Aquaculture is the fast-growing agricultural sector and has the ability to meet the growing
demand for protein nutritional security for future population. In future aquaculture is going to …

Haplotype-resolved and near-T2T genome assembly of the African catfish (Clarias gariepinus)

JA Nguinkal, YAB Zoclanclounon, RM Brunner, Y Chen… - Scientific Data, 2024 - nature.com
Airbreathing catfish are stenohaline freshwater fish capable of withstanding various
environmental conditions and farming practices, including breathing atmospheric oxygen …

Fish antifreeze protein origin in sculpins by frameshifting within a duplicated housekeeping gene

LA Graham, PL Davies - The FEBS Journal, 2024 - Wiley Online Library
Antifreeze proteins (AFPs) are found in a variety of marine cold‐water fishes where they
prevent freezing by binding to nascent ice crystals. Their diversity (types I, II, III and …

Application of second-generation sequencing (SGS) and third generation sequencing (TGS) in aquaculture breeding program

LL Wong, SA Razali, ZM Deris, M Danish-Daniel… - Aquaculture, 2022 - Elsevier
High-throughput sequencing technologies have expanded gene-based to genome-wide
research in aquaculture species. Several techniques adopting the Second Generation …

Chromosome-level assembly and annotation of the blue catfish Ictalurus furcatus, an aquaculture species for hybrid catfish reproduction, epigenetics, and heterosis …

H Wang, B Su, IAE Butts, RA Dunham, X Wang - GigaScience, 2022 - academic.oup.com
Background The blue catfish is of great value in aquaculture and recreational fisheries. The
F1 hybrids of female channel catfish (Ictalurus punctatus)× male blue catfish …

Molecular characterization and structural dynamics of Aquaporin1 from walking catfish in lipid bilayers

BK Behera, J Parhi, B Dehury, AK Rout, A Khatei… - International Journal of …, 2022 - Elsevier
Aquaporin's (AQPs) are the major superfamily of small integral membrane proteins that
facilitates transportation of water, urea, ammonia, glycerol and ions across biological cell …

A chromosome-level genome assembly of Hong Kong catfish (Clarias fuscus) uncovers a sex-determining region

CX Tian, XH Lin, DY Zhou, Y Chen, YJ Shen, MH Ye… - BMC genomics, 2023 - Springer
Abstract Background Hong Kong catfish (Clarias fuscus) is an ecologically and economically
important species that is widely distributed in freshwater regions of southern China. Hong …

A chromosome-level genome of the striated frogfish (Antennarius striatus)

M Hu, D Fan, J Hao, F Zhang, W Xu, C Zhu, K Wang… - Scientific Data, 2024 - nature.com
The striated frogfish (Antennarius striatus), a member of the sub-order Antennarioidei within
the order Lophiiformes, possesses remarkable adaptations. These include the ability to …

The Utilization of Reference-Guided Assembly and In Silico Libraries Improves the Draft Genome of Clarias batrachus and Culter alburnus

K Liu, N Xie, Y Wang, X Liu - Marine Biotechnology, 2023 - Springer
Long-read sequencing technologies can generate highly contiguous genome assemblies
compared to short-read methods. However, their higher cost often poses a significant …