Crystal structure of heliorhodopsin

W Shihoya, K Inoue, M Singh, M Konno, S Hososhima… - Nature, 2019 - nature.com
Heliorhodopsins (HeRs) are a family of rhodopsins that was recently discovered using
functional metagenomics. They are widely present in bacteria, archaea, algae and algal …

Diverse heliorhodopsins detected via functional metagenomics in freshwater Actinobacteria, Chloroflexi and Archaea

A Chazan, A Rozenberg, K Mannen… - Environmental …, 2022 - Wiley Online Library
The recently discovered rhodopsin family of heliorhodopsins (HeRs) is abundant in diverse
microbial environments. So far, the functional and biological roles of HeRs remain unknown …

Proton transfer and conformational changes along the hydrogen bond network in heliorhodopsin

M Tsujimura, Y Chiba, K Saito, H Ishikita - Communications Biology, 2022 - nature.com
Heliorhodopsin releases a proton from the Schiff base during the L-state to M-state transition
but not toward the protein bulk surface. Here we investigate proton transfer and induced …

Heliorhodopsin helps photolyase to enhance the DNA repair capacity

J Shim, SG Cho, SH Kim, K Chuon, S Meas… - Microbiology …, 2022 - Am Soc Microbiol
Light quality is a significant factor for living organisms that have photosensory systems, such
as rhodopsin, a seven alpha-helical transmembrane protein with the retinal chromophore …

Low pH structure of heliorhodopsin reveals chloride binding site and intramolecular signaling pathway

JE Besaw, J Reichenwallner, P De Guzman, A Tucs… - Scientific reports, 2022 - nature.com
Within the microbial rhodopsin family, heliorhodopsins (HeRs) form a phylogenetically
distinct group of light-harvesting retinal proteins with largely unknown functions. We have …

Microbial rhodopsins

V Gordeliy, K Kovalev, E Bamberg… - … : Methods and Protocols, 2022 - Springer
The first microbial rhodopsin, a light-driven proton pump bacteriorhodopsin from
Halobacterium salinarum (Hs BR), was discovered in 1971. Since then, this seven-α-helical …

Internal Proton Transfer in the Activation of Heliorhodopsin

M Singh, M Hashimoto, K Katayama, Y Furutani… - Journal of Molecular …, 2024 - Elsevier
Heliorhodopsin (HeR), a recently discovered new rhodopsin family, contains a single
counterion of the protonated Schiff base, E108 in HeR from Thermoplasmatales archaeon …

Characterization of retinal chromophore and protonated Schiff base in Thermoplasmatales archaeon heliorhodopsin using solid-state NMR spectroscopy

S Suzuki, S Kumagai, T Nagashima, T Yamazaki… - Biophysical …, 2023 - Elsevier
Heliorhodopsin (HeR) is a seven-helical transmembrane protein with a retinal chromophore
that corresponds to a new rhodopsin family. HeR from the archaebacterium …

Picosecond quantum-classical dynamics reveals that the coexistence of light-induced microbial and animal chromophore rotary motion modulates the isomerization …

R Palombo, L Barneschi… - Physical Chemistry …, 2024 - pubs.rsc.org
Rhodopsins are light-responsive proteins forming two vast and evolutionary distinct
superfamilies whose functions are invariably triggered by the photoisomerization of a single …

Structural basis for unique color tuning mechanism in heliorhodopsin

T Tanaka, M Singh, W Shihoya, K Yamashita… - Biochemical and …, 2020 - Elsevier
Microbial rhodopsins comprise an opsin protein with seven transmembrane helices and a
retinal as the chromophore. An all-trans retinal is covalently bonded to a lysine residue …