Quantitative mass spectrometry in proteomics: critical review update from 2007 to the present

M Bantscheff, S Lemeer, MM Savitski… - Analytical and bioanalytical …, 2012 - Springer
Mass-spectrometry-based proteomics is continuing to make major contributions to the
discovery of fundamental biological processes and, more recently, has also developed into …

A review of feature selection techniques in bioinformatics

Y Saeys, I Inza, P Larranaga - bioinformatics, 2007 - academic.oup.com
Feature selection techniques have become an apparent need in many bioinformatics
applications. In addition to the large pool of techniques that have already been developed in …

Chemometric methods in data processing of mass spectrometry-based metabolomics: A review

L Yi, N Dong, Y Yun, B Deng, D Ren, S Liu… - Analytica chimica acta, 2016 - Elsevier
This review focuses on recent and potential advances in chemometric methods in relation to
data processing in metabolomics, especially for data generated from mass spectrometric …

Improved peak detection in mass spectrum by incorporating continuous wavelet transform-based pattern matching

P Du, WA Kibbe, SM Lin - bioinformatics, 2006 - academic.oup.com
Motivation: A major problem for current peak detection algorithms is that noise in mass
spectrometry (MS) spectra gives rise to a high rate of false positives. The false positive rate …

Data processing for mass spectrometry-based metabolomics

M Katajamaa, M Orešič - Journal of chromatography A, 2007 - Elsevier
Modern analytical technologies afford comprehensive and quantitative investigation of a
multitude of different metabolites. Typical metabolomic experiments can therefore produce …

Performance of MALDI‐TOF MS platforms for fungal identification

C Cassagne, AC Normand, C L'Ollivier, S Ranque… - Mycoses, 2016 - Wiley Online Library
Matrix‐assisted laser desorption/ionisation mass spectrometry (MALDI‐TOF MS) is
increasingly used by clinical microbiology laboratories to cope with the need for rapid, cost …

A review of the literature on big data analytics in healthcare

P Galetsi, K Katsaliaki - Journal of the Operational Research …, 2020 - Taylor & Francis
Big data analytics (BDA) is of paramount importance in healthcare aspects such as patient
diagnostics, fast epidemic recognition, and improvement of patient management. The …

MSVM-RFE: extensions of SVM-RFE for multiclass gene selection on DNA microarray data

X Zhou, DP Tuck - Bioinformatics, 2007 - academic.oup.com
Motivation: Given the thousands of genes and the small number of samples, gene selection
has emerged as an important research problem in microarray data analysis. Support Vector …

Fine mapping the spatial distribution and concentration of unlabeled drugs within tissue micro-compartments using imaging mass spectrometry

A Nilsson, TE Fehniger, L Gustavsson, M Andersson… - PloS one, 2010 - journals.plos.org
Readouts that define the physiological distributions of drugs in tissues are an unmet
challenge and at best imprecise, but are needed in order to understand both the …

Knowledge discovery in metabolomics: an overview of MS data handling

J Boccard, JL Veuthey, S Rudaz - Journal of separation science, 2010 - Wiley Online Library
While metabolomics attempts to comprehensively analyse the small molecules
characterising a biological system, MS has been promoted as the gold standard to study the …