Revision of the 'Candidatus Phytoplasma' species description guidelines
A Bertaccini, Y Arocha-Rosete… - … of Systematic and …, 2022 - microbiologyresearch.org
The genus 'Candidatus Phytoplasma'was proposed to accommodate cell wall-less bacteria
that are molecularly and biochemically incompletely characterized, and colonize plant …
that are molecularly and biochemically incompletely characterized, and colonize plant …
An Update on the Genus Aeromonas: Taxonomy, Epidemiology, and Pathogenicity
A Fernández-Bravo, MJ Figueras - Microorganisms, 2020 - mdpi.com
The genus Aeromonas belongs to the Aeromonadaceae family and comprises a group of
Gram-negative bacteria widely distributed in aquatic environments, with some species able …
Gram-negative bacteria widely distributed in aquatic environments, with some species able …
A taxonomic note on the genus Lactobacillus: Description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae …
The genus Lactobacillus comprises 261 species (at March 2020) that are extremely diverse
at phenotypic, ecological and genotypic levels. This study evaluated the taxonomy of …
at phenotypic, ecological and genotypic levels. This study evaluated the taxonomy of …
A highly conserved core bacterial microbiota with nitrogen-fixation capacity inhabits the xylem sap in maize plants
Microbiomes are important for crop performance. However, a deeper knowledge of crop-
associated microbial communities is needed to harness beneficial host-microbe interactions …
associated microbial communities is needed to harness beneficial host-microbe interactions …
Proposed minimal standards for the use of genome data for the taxonomy of prokaryotes
Advancement of DNA sequencing technology allows the routine use of genome sequences
in the various fields of microbiology. The information held in genome sequences proved to …
in the various fields of microbiology. The information held in genome sequences proved to …
High throughput ANI analysis of 90K prokaryotic genomes reveals clear species boundaries
A fundamental question in microbiology is whether there is continuum of genetic diversity
among genomes, or clear species boundaries prevail instead. Whole-genome similarity …
among genomes, or clear species boundaries prevail instead. Whole-genome similarity …
Large-scale generation and analysis of filamentous fungal DNA barcodes boosts coverage for kingdom fungi and reveals thresholds for fungal species and higher …
Species identification lies at the heart of biodiversity studies that has in recent years
favoured DNA-based approaches. Microbial Biological Resource Centres are a rich source …
favoured DNA-based approaches. Microbial Biological Resource Centres are a rich source …
A large-scale evaluation of algorithms to calculate average nucleotide identity
Average nucleotide identity (ANI) is a category of computational analysis that can be used to
define species boundaries of Archaea and Bacteria. Calculating ANI usually involves the …
define species boundaries of Archaea and Bacteria. Calculating ANI usually involves the …
Introducing EzBioCloud: a taxonomically united database of 16S rRNA gene sequences and whole-genome assemblies
The recent advent of DNA sequencing technologies facilitates the use of genome
sequencing data that provide means for more informative and precise classification and …
sequencing data that provide means for more informative and precise classification and …
The Microbial Genomes Atlas (MiGA) webserver: taxonomic and gene diversity analysis of Archaea and Bacteria at the whole genome level
The small subunit ribosomal RNA gene (16S rRNA) has been successfully used to
catalogue and study the diversity of prokaryotic species and communities but it offers limited …
catalogue and study the diversity of prokaryotic species and communities but it offers limited …