[HTML][HTML] Outbreak. info genomic reports: scalable and dynamic surveillance of SARS-CoV-2 variants and mutations

K Gangavarapu, AA Latif, JL Mullen, M Alkuzweny… - Nature …, 2023 - nature.com
In response to the emergence of SARS-CoV-2 variants of concern, the global scientific
community, through unprecedented effort, has sequenced and shared over 11 million …

[HTML][HTML] Complete map of SARS-CoV-2 RBD mutations that escape the monoclonal antibody LY-CoV555 and its cocktail with LY-CoV016

TN Starr, AJ Greaney, AS Dingens, JD Bloom - Cell Reports Medicine, 2021 - cell.com
Monoclonal antibodies and antibody cocktails are a promising therapeutic and prophylaxis
for coronavirus disease 2019 (COVID-19). However, ongoing evolution of severe acute …

[HTML][HTML] Characteristics of SARS-CoV-2 variants of concern B. 1.1. 7, B. 1.351 or P. 1: data from seven EU/EEA countries, weeks 38/2020 to 10/2021

T Funk, A Pharris, G Spiteri, N Bundle… - …, 2021 - eurosurveillance.org
We compared 19,207 cases of SARS-CoV-2 variant B. 1.1. 7/S gene target failure (SGTF),
436 B. 1.351 and 352 P. 1 to non-variant cases reported by seven European countries …

Structural basis for potent antibody neutralization of SARS-CoV-2 variants including B. 1.1. 529

T Zhou, L Wang, J Misasi, A Pegu, Y Zhang, DR Harris… - Science, 2022 - science.org
The rapid spread of the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) B.
1.1. 529 (Omicron) variant and its resistance to neutralization by vaccinee and convalescent …

Ultrapotent antibodies against diverse and highly transmissible SARS-CoV-2 variants

L Wang, T Zhou, Y Zhang, ES Yang, CA Schramm… - Science, 2021 - science.org
INTRODUCTION Worldwide appearance of severe acute respiratory syndrome coronavirus
2 (SARS-CoV-2) variants of concern (VOCs) with increased transmissibility and resistance to …

[HTML][HTML] Vaccine-escape and fast-growing mutations in the United Kingdom, the United States, Singapore, Spain, India, and other COVID-19-devastated countries

R Wang, J Chen, K Gao, GW Wei - Genomics, 2021 - Elsevier
Abstract Recently, the SARS-CoV-2 variants from the United Kingdom (UK), South Africa,
and Brazil have received much attention for their increased infectivity, potentially high …

[HTML][HTML] The emergence and ongoing convergent evolution of the SARS-CoV-2 N501Y lineages

DP Martin, S Weaver, H Tegally, JE San, SD Shank… - Cell, 2021 - cell.com
The independent emergence late in 2020 of the B. 1.1. 7, B. 1.351, and P. 1 lineages of
SARS-CoV-2 prompted renewed concerns about the evolutionary capacity of this virus to …

SARS-CoV-2 evolution in animals suggests mechanisms for rapid variant selection

L Bashor, RB Gagne, AM Bosco-Lauth… - Proceedings of the …, 2021 - National Acad Sciences
SARS-CoV-2 spillback from humans into domestic and wild animals has been well
documented, and an accumulating number of studies illustrate that human-to-animal …

Scenario analysis of COVID-19 transmission dynamics in Malaysia with the possibility of reinfection and limited medical resources scenarios

AM Salman, I Ahmed, MH Mohd, MS Jamiluddin… - Computers in biology …, 2021 - Elsevier
COVID-19 is a major health threat across the globe, which causes severe acute respiratory
syndrome (SARS), and it is highly contagious with significant mortality. In this study, we …

“But mouse, you are not alone”: On some severe acute respiratory syndrome coronavirus 2 variants infecting mice

MJ Kuiper, LOW Wilson, S Mangalaganesh, C Lee… - ILAR …, 2021 - academic.oup.com
In silico predictions combined with in vitro, in vivo, and in situ observations collectively
suggest that mouse adaptation of the severe acute respiratory syndrome 2 virus requires an …