Machine learning in marine ecology: an overview of techniques and applications

P Rubbens, S Brodie, T Cordier… - ICES Journal of …, 2023 - academic.oup.com
Abstract Machine learning covers a large set of algorithms that can be trained to identify
patterns in data. Thanks to the increase in the amount of data and computing power …

A review on quantification learning

P González, A Castaño, NV Chawla… - ACM Computing Surveys …, 2017 - dl.acm.org
The task of quantification consists in providing an aggregate estimation (eg, the class
distribution in a classification problem) for unseen test sets, applying a model that is trained …

Deep learning and transfer learning features for plankton classification

A Lumini, L Nanni - Ecological informatics, 2019 - Elsevier
Plankton are the most fundamental components of ocean ecosystems, due to their function
at many levels of the oceans food chain. Studying and monitoring plankton distribution is …

The Scripps Plankton Camera system: A framework and platform for in situ microscopy

EC Orenstein, D Ratelle… - Limnology and …, 2020 - Wiley Online Library
The large data sets provided by in situ optical microscopes are allowing us to answer
longstanding questions about the dynamics of planktonic ecosystems. To deal with the influx …

Improving plankton image classification using context metadata

JS Ellen, CA Graff, MD Ohman - Limnology and Oceanography …, 2019 - Wiley Online Library
Advances in both hardware and software are enabling rapid proliferation of in situ plankton
imaging methods, requiring more effective machine learning approaches to image …

Deep learning for plankton and coral classification

A Lumini, L Nanni, G Maguolo - Applied Computing and Informatics, 2020 - emerald.com
In this paper, we present a study about an automated system for monitoring underwater
ecosystems. The system here proposed is based on the fusion of different deep learning …

Automatic plankton quantification using deep features

P González, A Castaño, EE Peacock… - Journal of Plankton …, 2019 - academic.oup.com
The study of marine plankton data is vital to monitor the health of the world's oceans. In
recent decades, automatic plankton recognition systems have proved useful to address the …

Reporting of methods for automated devices: A systematic review and recommendation for studies using FlowCam for phytoplankton

BM Owen, CS Hallett, JJ Cosgrove… - Limnology and …, 2022 - Wiley Online Library
Accurate and detailed reporting of methods is essential for scientific progress, yet it is widely
accepted that authors across all scientific fields tend to provide insufficient methods detail …

MorphoCluster: efficient annotation of plankton images by clustering

SM Schröder, R Kiko, R Koch - Sensors, 2020 - mdpi.com
In this work, we present MorphoCluster, a software tool for data-driven, fast, and accurate
annotation of large image data sets. While already having surpassed the annotation rate of …

Development of a Buoy-Borne Underwater Imaging System for In Situ Mesoplankton Monitoring of Coastal Waters

J Li, T Chen, Z Yang, L Chen, P Liu… - IEEE Journal of …, 2021 - ieeexplore.ieee.org
This article reports the development of an underwater imaging system and its trial on a
moored surface buoy for in situ plankton monitoring of coastal waters. The imager features …