Dry surface biofilms in the food processing industry: An overview on surface characteristics, adhesion and biofilm formation, detection of biofilms, and dry sanitization …

VPP Alonso, MPMBB Gonçalves… - … Reviews in Food …, 2023 - Wiley Online Library
Bacterial biofilm formation in low moisture food processing (LMF) plants is related to matters
of food safety, production efficiency, economic loss, and reduced consumer trust. Dry …

Accelerating Genetic Sensor Development, Scale-up, and Deployment Using Synthetic Biology

SHN Joshi, C Jenkins, D Ulaeto… - BioDesign …, 2024 - spj.science.org
Living cells are exquisitely tuned to sense and respond to changes in their environment.
Repurposing these systems to create engineered biosensors has seen growing interest in …

The master regulator OxyR orchestrates bacterial oxidative stress response genes in space and time

D Choudhary, KR Foster, S Uphoff - Cell Systems, 2024 - cell.com
Bacteria employ diverse gene regulatory networks to survive stress, but deciphering the
underlying logic of these complex networks has proved challenging. Here, we use time …

Ribosome profiling reveals the fine-tuned response of Escherichia coli to mild and severe acid stress

K Schumacher, R Gelhausen, W Kion-Crosby… - Msystems, 2023 - Am Soc Microbiol
The ability to respond to acidic environments is crucial for neutralophilic bacteria.
Escherichia coli has a well-characterized regulatory network that triggers a multitude of …

[HTML][HTML] Gene Networks and Pathways Involved in Escherichia coli Response to Multiple Stressors

EK Abdelwahed, NA Hussein, A Moustafa, NA Moneib… - Microorganisms, 2022 - mdpi.com
Stress response helps microorganisms survive extreme environmental conditions and host
immunity, making them more virulent or drug resistant. Although both reductionist …

Ozone disinfection for elimination of bacteria and degradation of SARS-CoV2 RNA for medical environments

C Westover, S Rahmatulloev, D Danko, EE Afshin… - Genes, 2022 - mdpi.com
Pathogenic bacteria and viruses in medical environments can lead to treatment
complications and hospital-acquired infections. Current disinfection protocols do not …

Genome reduction improves octanoic acid production in scale down bioreactors

WT Cordell, G Avolio, R Takors… - Microbial …, 2024 - Wiley Online Library
Microorganisms in large‐scale bioreactors are exposed to heterogeneous environmental
conditions due to physical mixing constraints. Nutritional gradients can lead to transient …

RNAP Promoter Search and Transcription Kinetics in Live E. coli Cells

K Bettridge, FE Harris, N Yehya… - The Journal of Physical …, 2023 - ACS Publications
Bacterial transcription has been studied extensively in vitro, which has provided detailed
molecular mechanisms of transcription. The in vivo cellular environment, however, may …

[HTML][HTML] Rethinking dormancy: Antibiotic persisters are metabolically active, non-growing cells

KMT Rahman, R Amaratunga, XY Butzin… - International Journal of …, 2025 - Elsevier
Objectives Bacterial persisters are a subpopulation of multidrug-tolerant cells capable of
surviving and resuming activity after exposure to bactericidal antibiotic concentrations …

Laboratory evolution of E. coli with a natural vitamin B12 analog reveals roles for cobamide uptake and adenosylation in methionine synthase-dependent growth

KC Mok, ZF Hallberg, RR Procknow… - Journal of …, 2025 - journals.asm.org
Bacteria encounter chemically similar nutrients in their environment, which impact their
growth in distinct ways. Among such nutrients are cobamides, the structurally diverse family …