Application of SMILES notation based optimal descriptors in drug discovery and design

AM Veselinovic, JB Veselinovic… - Current topics in …, 2015 - ingentaconnect.com
SMILES notation based optimal descriptors as a universal tool for the QSAR analysis with
further application in drug discovery and design is presented. The basis of this QSAR …

Is it reliable to use common molecular docking methods for comparing the binding affinities of enantiomer pairs for their protein target?

D Ramírez, J Caballero - International journal of molecular sciences, 2016 - mdpi.com
Molecular docking is a computational chemistry method which has become essential for the
rational drug design process. In this context, it has had great impact as a successful tool for …

JAZ is essential for ligand specificity of the COI1/JAZ co-receptor

I Monte, J Caballero, AM Zamarreño… - Proceedings of the …, 2022 - National Acad Sciences
Jasmonates are phytohormones that regulate defense and developmental processes in land
plants. Despite the chemical diversity of jasmonate ligands in different plant lineages, they …

Mutagenicity: Qsar-quasi-qsar-nano-qsar

AP Toropova, AA Toropov - Mini Reviews in Medicinal …, 2015 - ingentaconnect.com
Mutagenic potential of biphenyl-4-amines and multi-walled carbon nanotubes (MWCNTs)
have been modeled by optimal descriptors. The optimal descriptors are calculated with the …

Design, synthesis, structure, in vitro cytotoxic activity evaluation and docking studies on target enzyme GSK-3β of new indirubin-3ʹ-oxime derivatives

NT Dan, HD Quang, V Van Truong, D Huu Nghi… - Scientific Reports, 2020 - nature.com
The addition of chalcone and amine components into indirubin-3′-oxime resulted in 15
new derivatives with high yields. Structures of new derivatives were also elucidated through …

[图书][B] Potential therapeutic applications of nano-antioxidants

SS Sanjay, AK Shukla - 2021 - Springer
Traditional antioxidant therapies have been less effective in preventing various diseases
caused by oxidative stress. Nanoparticle antioxidants have emerged as a new expansion of …

Omega hydroxylated JA-Ile is an endogenous bioactive jasmonate that signals through the canonical jasmonate signaling pathway

GH Jimenez-Aleman, M Almeida-Trapp… - … et Biophysica Acta (BBA …, 2019 - Elsevier
Jasmonates are fatty acid derivatives that control several plant processes including growth,
development and defense. Despite the chemical diversity of jasmonates, only jasmonoyl-L …

Theoretical studies on the selectivity mechanisms of glycogen synthase kinase 3β (GSK3β) with pyrazine ATP-competitive inhibitors by 3D-QSAR, molecular docking …

J Zhu, Y Wu, L Xu, J Jin - Current Computer-Aided Drug …, 2020 - ingentaconnect.com
Background: Glycogen synthase kinase-3 (GSK3) is associated with various key biological
processes and has been considered as an important therapeutic target for the treatment of …

Rational Design of Novel Phosphoinositide 3‐Kinase Gamma (PI3Kγ) Selective Inhibitors: A Computational Investigation Integrating 3D‐QSAR, Molecular Docking …

K Li, J Zhu, L Xu, J Jin - Chemistry & biodiversity, 2019 - Wiley Online Library
Abstract Phosphoinositide 3‐kinase gamma (PI3Kγ) draws an increasing attention due to its
link with deadly cancer, chronic inflammation and allergy. But the development of PI3Kγ …

Computational modeling to explain why 5, 5-diarylpentadienamides are trpv1 antagonists

J Caballero - Molecules, 2021 - mdpi.com
Several years ago, the crystallographic structures of the transient receptor potential vanilloid
1 (TRPV1) in the presence of agonists and antagonists were reported, providing structural …