Recommendations for reporting ion mobility Mass Spectrometry measurements

V Gabelica, AA Shvartsburg, C Afonso… - Mass spectrometry …, 2019 - Wiley Online Library
Here we present a guide to ion mobility mass spectrometry experiments, which covers both
linear and nonlinear methods: what is measured, how the measurements are done, and how …

Ion mobility-mass spectrometry: time-dispersive instrumentation

JC May, JA McLean - Analytical chemistry, 2015 - ACS Publications
The field of ion mobility-mass spectrometry (IM-MS) has grown with significant momentum in
recent years in both fundamental advances and pioneering applications. A search of the …

Online parallel accumulation–serial fragmentation (PASEF) with a novel trapped ion mobility mass spectrometer

F Meier, AD Brunner, S Koch, H Koch, M Lubeck… - Molecular & Cellular …, 2018 - ASBMB
In bottom-up proteomics, peptides are separated by liquid chromatography with elution peak
widths in the range of seconds, whereas mass spectra are acquired in about 100 …

An interlaboratory evaluation of drift tube ion mobility–mass spectrometry collision cross section measurements

SM Stow, TJ Causon, X Zheng… - Analytical …, 2017 - ACS Publications
Collision cross section (CCS) measurements resulting from ion mobility–mass spectrometry
(IM-MS) experiments provide a promising orthogonal dimension of structural information in …

Collision cross sections of proteins and their complexes: a calibration framework and database for gas-phase structural biology

MF Bush, Z Hall, K Giles, J Hoyes… - Analytical …, 2010 - ACS Publications
Collision cross sections in both helium and nitrogen gases were measured directly using a
drift cell with RF ion confinement inserted within a quadrupole/ion mobility/time-of-flight …

Conformational ordering of biomolecules in the gas phase: nitrogen collision cross sections measured on a prototype high resolution drift tube ion mobility-mass …

JC May, CR Goodwin, NM Lareau, KL Leaptrot… - Analytical …, 2014 - ACS Publications
Ion mobility-mass spectrometry measurements which describe the gas-phase scaling of
molecular size and mass are of both fundamental and pragmatic utility. Fundamentally, such …

Ion mobility mass spectrometry of proteins and protein assemblies

C Uetrecht, RJ Rose, E van Duijn, K Lorenzen… - Chemical Society …, 2010 - pubs.rsc.org
Traditionally, mass spectrometry has been a powerful analytical method enabling the
structural analysis of small molecules, and later on peptides and proteins. With the advent of …

Ion mobility mass spectrometry of peptide ions: effects of drift gas and calibration strategies

MF Bush, IDG Campuzano, CV Robinson - Analytical chemistry, 2012 - ACS Publications
One difficulty in using ion mobility (IM) mass spectrometry (MS) to improve the specificity of
peptide ion assignments is that IM separations are performed using a range of pressures …

Deep learning the collisional cross sections of the peptide universe from a million experimental values

F Meier, ND Köhler, AD Brunner, JMH Wanka… - Nature …, 2021 - nature.com
The size and shape of peptide ions in the gas phase are an under-explored dimension for
mass spectrometry-based proteomics. To investigate the nature and utility of the peptide …

Biomolecule analysis by ion mobility spectrometry

BC Bohrer, SI Merenbloom, SL Koeniger… - Annu. Rev. Anal …, 2008 - annualreviews.org
Although nonnative protein conformations, including intermediates along the folding
pathway and kinetically trapped misfolded species that disfavor the native state, are rarely …