Immunotherapy, inflammation and colorectal cancer

CR Lichtenstern, RK Ngu, S Shalapour, M Karin - Cells, 2020 - mdpi.com
Colorectal cancer (CRC) is the third most common cancer type, and third highest in mortality
rates among cancer-related deaths in the United States. Originating from intestinal epithelial …

Lynch syndrome and MSI-H cancers: from mechanisms to “off-the-shelf” cancer vaccines

V Roudko, C Cimen Bozkus, B Greenbaum… - Frontiers in …, 2021 - frontiersin.org
Defective DNA mismatch repair (dMMR) is associated with many cancer types including
colon, gastric, endometrial, ovarian, hepatobiliary tract, urinary tract, brain and skin cancers …

Classification and characterization of microsatellite instability across 18 cancer types

RJ Hause, CC Pritchard, J Shendure, SJ Salipante - Nature medicine, 2016 - nature.com
Microsatellite instability (MSI), the spontaneous loss or gain of nucleotides from repetitive
DNA tracts, is a diagnostic phenotype for gastrointestinal, endometrial, and colorectal …

Validation of microsatellite instability detection using a comprehensive plasma-based genotyping panel

J Willis, MI Lefterova, A Artyomenko, PM Kasi… - Clinical Cancer …, 2019 - AACR
Purpose: To analytically and clinically validate microsatellite instability (MSI) detection using
cell-free DNA (cfDNA) sequencing. Experimental Design: Pan-cancer MSI detection using …

MSIsensor: microsatellite instability detection using paired tumor-normal sequence data

B Niu, K Ye, Q Zhang, C Lu, M Xie, MD McLellan… - …, 2014 - academic.oup.com
Motivation: Microsatellite instability (MSI) is an important indicator of larger genome
instability and has been linked to many genetic diseases, including Lynch syndrome. MSI …

Performance evaluation for rapid detection of pan-cancer microsatellite instability with MANTIS

EA Kautto, R Bonneville, J Miya, L Yu, MA Krook… - …, 2016 - pmc.ncbi.nlm.nih.gov
In current clinical practice, microsatellite instability (MSI) and mismatch repair deficiency
detection is performed with MSI-PCR and immunohistochemistry. Recent research has …

The clinical utilization of circulating cell free DNA (CCFDNA) in blood of cancer patients

YI Elshimali, H Khaddour, M Sarkissyan, Y Wu… - International journal of …, 2013 - mdpi.com
Qualitative and quantitative testing of circulating cell free DNA (CCFDNA) can be applied for
the management of malignant and benign neoplasms. Detecting circulating DNA in cancer …

Microsatellite instability: from the implementation of the detection to a prognostic and predictive role in cancers

M Amato, R Franco, G Facchini, R Addeo… - International journal of …, 2022 - mdpi.com
Microsatellite instability (MSI) has been identified in several tumors arising from either
germline or somatic aberration. The presence of MSI in cancer predicts the sensitivity to …

Portrait of a cancer: mutational signature analyses for cancer diagnostics

A Van Hoeck, NH Tjoonk, R van Boxtel, E Cuppen - BMC cancer, 2019 - Springer
Background In the past decade, systematic and comprehensive analyses of cancer
genomes have identified cancer driver genes and revealed unprecedented insight into the …

Molecular and computational methods for the detection of microsatellite instability in cancer

LG Baudrin, JF Deleuze, A How-Kit - Frontiers in oncology, 2018 - frontiersin.org
Microsatellite instability (MSI) is a genomic alteration in which microsatellites, usually of one
to four nucleotide repeats, accumulate mutations corresponding to deletions/insertions of a …