RCSB Protein Data Bank: powerful new tools for exploring 3D structures of biological macromolecules for basic and applied research and education in fundamental …

SK Burley, C Bhikadiya, C Bi, S Bittrich… - Nucleic acids …, 2021 - academic.oup.com
Abstract The Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB
PDB), the US data center for the global PDB archive and a founding member of the …

PDB‐101: Educational resources supporting molecular explorations through biology and medicine

C Zardecki, S Dutta, DS Goodsell, R Lowe… - Protein …, 2022 - Wiley Online Library
Abstract The Protein Data Bank (PDB) archive is a rich source of information in the form of
atomic‐level three‐dimensional (3D) structures of biomolecules experimentally determined …

Open-access data: A cornerstone for artificial intelligence approaches to protein structure prediction

SK Burley, HM Berman - Structure, 2021 - cell.com
Summary The Protein Data Bank (PDB) was established in 1971 to archive three-
dimensional (3D) structures of biological macromolecules as a public good. Fifty years later …

[HTML][HTML] Protein Data Bank: from two epidemics to the global pandemic to mRNA vaccines and Paxlovid

SK Burley - Current Opinion in Structural Biology, 2025 - Elsevier
Structural biologists and the open-access Protein Data Bank (PDB) played decisive roles in
combating the COVID-19 pandemic. Global biostructure data were turned into global …

RCSB Protein Data bank: Tools for visualizing and understanding biological macromolecules in 3D

SK Burley, C Bhikadiya, C Bi, S Bittrich, H Chao… - Protein …, 2022 - Wiley Online Library
Now in its 52nd year of continuous operations, the Protein Data Bank (PDB) is the premiere
open‐access global archive housing three‐dimensional (3D) biomolecular structure data. It …

CellPAINT: turnkey illustration of molecular cell biology

A Gardner, L Autin, D Fuentes, M Maritan… - Frontiers in …, 2021 - frontiersin.org
CellPAINT is an interactive digital tool that allows non-expert users to create illustrations of
the molecular structure of cells and viruses. We present a new release with several key …

Children's drawings of coronavirus

L Martinerie, D Bernoux, L Giovannini-Chami… - Pediatrics, 2021 - publications.aap.org
OBJECTIVES To understand how children perceive severe acute respiratory syndrome
coronavirus 2 (SARS-CoV-2) in relation to public representations and to evaluate their …

Visualising viruses

A Slater, N Nair, R Suétt… - Journal of General …, 2022 - microbiologyresearch.org
Viruses pose a challenge to our imaginations. They exert a highly visible influence on the
world in which we live, but operate at scales we cannot directly perceive and without a clear …

[PDF][PDF] RCSB Protein Data Bank: supporting research and education worldwide through explorations of experimentally determined and computationally predicted …

SK Burley, DW Piehl, B Vallat, C Zardecki - IUCrJ, 2024 - journals.iucr.org
The Protein Data Bank (PDB) was established as the first open-access digital data resource
in biology and medicine in 1971 with seven X-ray crystal structures of proteins. Today, the …

[HTML][HTML] Screening of world approved drugs against highly dynamical spike glycoprotein of SARS-CoV-2 using CaverDock and machine learning

GP Pinto, O Vavra, SM Marques, J Filipovic… - Computational and …, 2021 - Elsevier
The new severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) causes
pathological pulmonary symptoms. Most efforts to develop vaccines and drugs against this …