[HTML][HTML] Adaptation and diversification on islands

JB Losos, RE Ricklefs - Nature, 2009 - nature.com
Charles Darwin's travels on HMS Beagle taught him that islands are an important source of
evidence for evolution. Because many islands are young and have relatively few species …

Lizards as model organisms for linking phylogeographic and speciation studies

A Camargo, B Sinervo, JW Sites Jr - Molecular Ecology, 2010 - Wiley Online Library
Lizards have been model organisms for ecological and evolutionary studies from individual
to community levels at multiple spatial and temporal scales. Here we highlight lizards as …

How robust are “isolation with migration” analyses to violations of the IM model? A simulation study

JL Strasburg, LH Rieseberg - Molecular biology and evolution, 2010 - academic.oup.com
Methods developed over the past decade have made it possible to estimate molecular
demographic parameters such as effective population size, divergence time, and gene flow …

Molecular phylogeny of an endemic radiation of Cuban toads (Bufonidae: Peltophryne) based on mitochondrial and nuclear genes

R Alonso, AJ Crawford… - Journal of …, 2012 - Wiley Online Library
Aim In this study we present a molecular phylogenetic and phylogeographical analysis of
Peltophryne (Anura: Bufonidae), an endemic genus of Antillean toads, to investigate the …

Nuclear gene phylogeography using PHASE: dealing with unresolved genotypes, lost alleles, and systematic bias in parameter estimation

RC Garrick, P Sunnucks, RJ Dyer - BMC Evolutionary Biology, 2010 - Springer
Background A widely-used approach for screening nuclear DNA markers is to obtain
sequence data and use bioinformatic algorithms to estimate which two alleles are present in …

Statistical hypothesis testing in intraspecific phylogeography: nested clade phylogeographical analysis vs. approximate Bayesian computation

AR Templeton - Molecular ecology, 2009 - Wiley Online Library
Nested clade phylogeographical analysis (NCPA) and approximate Bayesian computation
(ABC) have been used to test phylogeographical hypotheses. Multilocus NCPA tests null …

Speciation with gene flow in whiptail lizards from a Neotropical xeric biome

EF Oliveira, M Gehara, VA São‐Pedro… - Molecular …, 2015 - Wiley Online Library
Two main hypotheses have been proposed to explain the diversification of the Caatinga
biota. The riverine barrier hypothesis (RBH) claims that the São Francisco River (SFR) is a …

Phylogeography of freshwater planorbid snails reveals diversification patterns in Eurasian continental islands

T Saito, T Hirano, L Prozorova, V Tu Do… - BMC evolutionary …, 2018 - Springer
Background Islands have traditionally been the centre of evolutionary biological research,
but the dynamics of immigration and differentiation at continental islands have not been well …

Genetic differentiation among populations of a Hispaniolan trunk anole that exhibit geographical variation in dewlap colour

J Ng, RE Glor - Molecular Ecology, 2011 - Wiley Online Library
Long neglected by classic island biogeographical theory, speciation within and among
islands is increasingly recognized as a major contributor to insular diversity. Although the …

Why does a method that fails continue to be used? The answer

AR Templeton - Evolution, 2009 - academic.oup.com
It has been claimed that hundreds of researchers use nested clade phylogeographic
analysis (NCPA) based on what the method promises rather than requiring objective …