Mycovirus diversity and evolution revealed/inferred from recent studies

H Kondo, L Botella, N Suzuki - Annual Review of …, 2022 - annualreviews.org
High-throughput virome analyses with various fungi, from cultured or uncultured sources,
have led to the discovery of diverse viruses with unique genome structures and even neo …

Origin of viruses: primordial replicators recruiting capsids from hosts

M Krupovic, VV Dolja, EV Koonin - Nature Reviews Microbiology, 2019 - nature.com
Viruses are ubiquitous parasites of cellular life and the most abundant biological entities on
Earth. It is widely accepted that viruses are polyphyletic, but a consensus scenario for their …

Doubling of the known set of RNA viruses by metagenomic analysis of an aquatic virome

YI Wolf, S Silas, Y Wang, S Wu, M Bocek… - Nature …, 2020 - nature.com
RNA viruses in aquatic environments remain poorly studied. Here, we analysed the RNA
virome from approximately 10 l water from Yangshan Deep-Water Harbour near the Yangtze …

Viruses defined by the position of the virosphere within the replicator space

EV Koonin, VV Dolja, M Krupovic… - … and Molecular Biology …, 2021 - Am Soc Microbiol
Originally, viruses were defined as miniscule infectious agents that passed through filters
that retain even the smallest cells. Subsequently, viruses were considered obligate …

Porcine circoviruses: current status, knowledge gaps and challenges

T Opriessnig, AK Karuppannan, AMMG Castro… - Virus research, 2020 - Elsevier
Circoviruses (CV) include some of the smallest viruses known. They were named after their
circularly arranged single-stranded DNA genome with a gene encoding a conserved …

Multiple origins of prokaryotic and eukaryotic single-stranded DNA viruses from bacterial and archaeal plasmids

D Kazlauskas, A Varsani, EV Koonin… - Nature …, 2019 - nature.com
Single-stranded (ss) DNA viruses are a major component of the earth virome. In particular,
the circular, Rep-encoding ssDNA (CRESS-DNA) viruses show high diversity and …

Cressdnaviricota: a Virus Phylum Unifying Seven Families of Rep-Encoding Viruses with Single-Stranded, Circular DNA Genomes

M Krupovic, A Varsani, D Kazlauskas… - Journal of …, 2020 - Am Soc Microbiol
Mart Krupovic, a Arvind Varsani, b, c Darius Kazlauskas, d Mya Breitbart, e Eric Delwart, f, g
Karyna Rosario, e Natalya Yutin, h Yuri I. Wolf, h Balázs Harrach, i F. Murilo Zerbini, j …

Global organization and proposed megataxonomy of the virus world

EV Koonin, VV Dolja, M Krupovic… - Microbiology and …, 2020 - Am Soc Microbiol
Viruses and mobile genetic elements are molecular parasites or symbionts that coevolve
with nearly all forms of cellular life. The route of virus replication and protein expression is …

Discovery of several thousand highly diverse circular DNA viruses

MJ Tisza, DV Pastrana, NL Welch, B Stewart, A Peretti… - elife, 2020 - elifesciences.org
Although millions of distinct virus species likely exist, only approximately 9000 are
catalogued in GenBank's RefSeq database. We selectively enriched for the genomes of …

Deep roots and splendid boughs of the global plant virome

VV Dolja, M Krupovic, EV Koonin - Annual review of …, 2020 - annualreviews.org
Land plants host a vast and diverse virome that is dominated by RNA viruses, with major
additional contributions from reverse-transcribing and single-stranded (ss) DNA viruses …