X Didelot, AS Walker, TE Peto, DW Crook… - Nature Reviews …, 2016 - nature.com
Whole-genome sequencing has opened the way for investigating the dynamics and genomic evolution of bacterial pathogens during the colonization and infection of humans …
KA Jolley, JE Bray, MCJ Maiden - Wellcome open research, 2018 - ncbi.nlm.nih.gov
The PubMLST. org website hosts a collection of open-access, curated databases that integrate population sequence data with provenance and phenotype information for over …
M Inouye, H Dashnow, LA Raven, MB Schultz… - Genome medicine, 2014 - Springer
Rapid molecular typing of bacterial pathogens is critical for public health epidemiology, surveillance and infection control, yet routine use of whole genome sequencing (WGS) for …
We present a hierarchical genome-assembly process (HGAP) for high-quality de novo microbial genome assemblies using only a single, long-insert shotgun DNA library in …
QL Qin, BB Xie, XY Zhang, XL Chen… - Journal of …, 2014 - Am Soc Microbiol
Genomic information has already been applied to prokaryotic species definition and classification. However, the contribution of the genome sequence to prokaryotic genus …
Here, we review what is known about the microorganisms present in raw milk, including milk from cows, sheep, goats and humans. Milk, due to its high nutritional content, can support a …
Multilocus sequence typing (MLST) was proposed in 1998 as a portable sequence-based method for identifying clonal relationships among bacteria. Today, in the whole-genome era …
J Yang, X Zhang, YH Ma, G Gao, X Chen… - … applied materials & …, 2016 - ACS Publications
In this work, we prepared quaternized carbon dots (CDs) with simultaneous antibacterial and bacterial differentiation capabilities using a simple carboxyl–amine reaction between …
Plants have incredible developmental plasticity, enabling them to respond to a wide range of environmental conditions. Among these conditions is the presence of plant growth …