Rewriting the genetic code

T Mukai, MJ Lajoie, M Englert… - Annual review of …, 2017 - annualreviews.org
The genetic code—the language used by cells to translate their genomes into proteins that
perform many cellular functions—is highly conserved throughout natural life. Rewriting the …

Biochemistry of fluoroprolines: The prospect of making fluorine a bioelement

V Kubyshkin, R Davis, N Budisa - Beilstein journal of organic …, 2021 - beilstein-journals.org
Due to the heterocyclic structure and distinct conformational profile, proline is unique in the
repertoire of the 20 amino acids coded into proteins. Here, we summarize the biochemical …

Coevolution theory of the genetic code at age forty: pathway to translation and synthetic life

JTF Wong, SK Ng, WK Mat, T Hu, H Xue - Life, 2016 - mdpi.com
The origins of the components of genetic coding are examined in the present study. Genetic
information arose from replicator induction by metabolite in accordance with the metabolic …

Chemical evolution of a bacterial proteome

MG Hoesl, S Oehm, P Durkin, E Darmon… - Angewandte Chemie …, 2015 - Wiley Online Library
We have changed the amino acid set of the genetic code of Escherichia coli by evolving
cultures capable of growing on the synthetic noncanonical amino acid l‐β‐(thieno [3, 2‐b] …

Multiomics Analysis Provides Insight into the Laboratory Evolution of Escherichia coli toward the Metabolic Usage of Fluorinated Indoles

F Agostini, L Sinn, D Petras, CJ Schipp… - ACS Central …, 2020 - ACS Publications
Organofluorine compounds are known to be toxic to a broad variety of living beings in
different habitats, and chemical fluorination has been historically exploited by mankind for …

In vivo, in vitro and in silico: an open space for the development of microbe‐based applications of synthetic biology

A Danchin - Microbial Biotechnology, 2022 - Wiley Online Library
Living systems are studied using three complementary approaches: living cells, cell‐free
systems and computer‐mediated modelling. Progresses in understanding, allowing …

Adaptive properties of the genetically encoded amino acid alphabet are inherited from its subsets

M Ilardo, R Bose, M Meringer, B Rasulev… - Scientific Reports, 2019 - nature.com
Life uses a common set of 20 coded amino acids (CAAs) to construct proteins. This set was
likely canonicalized during early evolution; before this, smaller amino acid sets were …

Alternative biochemistries for alien life: basic concepts and requirements for the design of a robust biocontainment system in genetic isolation

C Diwo, N Budisa - Genes, 2018 - mdpi.com
The universal genetic code, which is the foundation of cellular organization for almost all
organisms, has fostered the exchange of genetic information from very different paths of …

Evolving a mitigation of the stress response pathway to change the basic chemistry of life

I Tolle, S Oehm, MG Hoesl… - Frontiers in Synthetic …, 2023 - frontiersin.org
Despite billions of years of evolution, there have been only minor changes in the number
and types of proteinogenic amino acids and the standard genetic code with codon …

Efforts and challenges in engineering the genetic code

X Lin, ACS Yu, TF Chan - Life, 2017 - mdpi.com
This year marks the 48th anniversary of Francis Crick's seminal work on the origin of the
genetic code, in which he first proposed the “frozen accident” hypothesis to describe …