Top down proteomics: facts and perspectives

AD Catherman, OS Skinner, NL Kelleher - Biochemical and biophysical …, 2014 - Elsevier
The rise of the “Top Down” method in the field of mass spectrometry-based proteomics has
ushered in a new age of promise and challenge for the characterization and identification of …

High-throughput proteomics

Z Zhang, S Wu, DL Stenoien… - Annual review of …, 2014 - annualreviews.org
Mass spectrometry (MS)–based high-throughput proteomics is the core technique for large-
scale protein characterization. Due to the extreme complexity of proteomes, sophisticated …

Kendrick mass defect spectrum: a compact visual analysis for ultrahigh-resolution broadband mass spectra

CA Hughey, CL Hendrickson, RP Rodgers… - Analytical …, 2001 - ACS Publications
At currently achievable Fourier transform ion cyclotron resonance broadband mass
spectrometry resolving power (m/Δ m 50%> 350 000 for 200< m/z< 1000), it would be …

Exact masses and chemical formulas of individual Suwannee River fulvic acids from ultrahigh resolution electrospray ionization Fourier transform ion cyclotron …

AC Stenson, AG Marshall, WT Cooper - Analytical chemistry, 2003 - ACS Publications
Molecular formulas have been assigned for 4626 individual Suwannee River fulvic acids
based on accurate mass measurements from ions generated by electrospray ionization and …

A universal algorithm for fast and automated charge state deconvolution of electrospray mass-to-charge ratio spectra

Z Zhang, AG Marshall - Journal of the American Society for Mass …, 1998 - Elsevier
This article describes a new algorithm for charge state determination and deconvolution of
electrospray ionization (ESI) mass-to-charge ratio spectra. The algorithm (Zscore) is based …

Characterization of heteroatom compounds in a crude oil and its saturates, aromatics, resins, and asphaltenes (SARA) and non-basic nitrogen fractions analyzed by …

Q Shi, D Hou, KH Chung, C Xu, S Zhao, Y Zhang - Energy & Fuels, 2010 - ACS Publications
A Liaohe crude oil was separated as saturates, aromatics, resins, and asphaltenes (SARA)
and neutral nitrogen fractions. The crude oil and its subfractions were analyzed by negative …

Developments in FT‐ICR MS instrumentation, ionization techniques, and data interpretation methods for petroleomics

Y Cho, A Ahmed, A Islam, S Kim - Mass spectrometry reviews, 2015 - Wiley Online Library
Because of the increasing importance of heavy and unconventional crude oil as an energy
source, there is a growing need for petroleomics: the pursuit of more complete and detailed …

Automated reduction and interpretation of

DM Horn, RA Zubarev… - Journal of the American …, 2000 - ACS Publications
Here a fully automated computer algorithm is applied to complex mass spectra of peptides
and proteins. This method uses a subtractive peak finding routine to locate possible isotopic …

Resolution and identification of elemental compositions for more than 3000 crude acids in heavy petroleum by negative-ion microelectrospray high-field Fourier …

K Qian, WK Robbins, CA Hughey, HJ Cooper… - Energy & …, 2001 - ACS Publications
Although crude acids are minor constituents in petroleum, they have significant implications
for crude oil geochemistry, corrosion, and commerce. We have previously demonstrated that …

Resolution of 11 000 compositionally distinct components in a single electrospray ionization Fourier transform ion cyclotron resonance mass spectrum of crude oil

CA Hughey, RP Rodgers, AG Marshall - Analytical chemistry, 2002 - ACS Publications
Mass spectrometry is well-suited for complex mixture analysis, because unlike other types of
spectroscopy, the number of mass spectral peaks per analyte is of order one. Here, we …