Conservation archaeogenomics: ancient DNA and biodiversity in the Anthropocene

CA Hofman, TC Rick, RC Fleischer… - Trends in ecology & …, 2015 - cell.com
There is growing consensus that we have entered the Anthropocene, a geologic epoch
characterized by human domination of the ecosystems of the Earth. With the future …

Using ancient DNA to understand evolutionary and ecological processes

L Orlando, A Cooper - Annual review of ecology, evolution, and …, 2014 - annualreviews.org
Ancient DNA provides a unique means to record genetic change through time and directly
observe evolutionary and ecological processes. Although mostly based on mitochondrial …

Increased mitochondrial DNA diversity in ancient Columbia River basin Chinook salmon Oncorhynchus tshawytscha

BM Johnson, BM Kemp, GH Thorgaard - PLoS One, 2018 - journals.plos.org
The Columbia River and its tributaries provide essential spawning and rearing habitat for
many salmonid species, including Chinook salmon (Oncorhynchus tshawytscha). Chinook …

Natural history collections as a resource for conservation genomics: Understanding the past to preserve the future

PM Benham, RCK Bowie - Journal of Heredity, 2023 - academic.oup.com
To avoid the worst outcomes of the current biodiversity crisis we need a deep understanding
of population responses to human-induced ecological change. Rapidly expanding access to …

Millennial-scale isotope records from a wide-ranging predator show evidence of recent human impact to oceanic food webs

AE Wiley, PH Ostrom, AJ Welch… - Proceedings of the …, 2013 - National Acad Sciences
Human exploitation of marine ecosystems is more recent in oceanic than near shore
regions, yet our understanding of human impacts on oceanic food webs is comparatively …

Demographic reconstruction from ancient DNA supports rapid extinction of the great auk

JE Thomas, GR Carvalho, J Haile, NJ Rawlence… - Elife, 2019 - elifesciences.org
The great auk was once abundant and distributed across the North Atlantic. It is now extinct,
having been heavily exploited for its eggs, meat, and feathers. We investigated the impact of …

Human ecodynamics in the M angareva I slands: a stratified sequence from N enega‐I ti R ock S helter (site AGA‐3, A gakauitai I sland)

PV Kirch, G Molle, C Nickelsen, P Mills… - Archaeology in …, 2015 - Wiley Online Library
The G ambier I slands (F rench P olynesia) are noted for their extreme deforestation and low
biodiversity in the post‐E uropean contact period. We report on the archaeological and …

Shifting baselines to thresholds: Reframing exploitation in the marine environment

LM Atmore, M Aiken, F Furni - Frontiers in Marine Science, 2021 - frontiersin.org
Current research on anthropogenic impacts on marine ecosystems often relies on the
concept of a “baseline,” which aims to describe ecosystems prior to human contact. Recent …

Falcon genomics in the context of conservation, speciation, and human culture

JJS Wilcox, S Boissinot, Y Idaghdour - Ecology and Evolution, 2019 - Wiley Online Library
Here, we review the diversity, evolutionary history, and genomics of falcons in the context of
their conservation and interactions with humans, and provide a perspective on how new …

Temporal genetic stability in natural populations of the waterflea Daphnia magna in response to strong selection pressure

L Orsini, H Marshall, M Cuenca Cambronero… - Molecular …, 2016 - Wiley Online Library
Studies monitoring changes in genetic diversity and composition through time allow a
unique understanding of evolutionary dynamics and persistence of natural populations …