Microbial functional genes involved in nitrogen fixation, nitrification and denitrification in forest ecosystems

DJ Levy-Booth, CE Prescott, SJ Grayston - Soil Biology and Biochemistry, 2014 - Elsevier
The understanding of nitrogen (N) cycling in forest ecosystems has undergone a major shift
in the past decade as molecular methods are being used to link microorganisms to key …

Biological nitrification inhibition in the rhizosphere: determining interactions and impact on microbially mediated processes and potential applications

P Nardi, HJ Laanbroek, GW Nicol… - FEMS Microbiology …, 2020 - academic.oup.com
Nitrification is the microbial conversion of reduced forms of nitrogen (N) to nitrate (NO3−),
and in fertilized soils it can lead to substantial N losses via NO3− leaching or nitrous oxide …

Environmental factors shaping the ecological niches of ammonia-oxidizing archaea

TH Erguder, N Boon, L Wittebolle… - FEMS microbiology …, 2009 - academic.oup.com
For more than 100 years it was believed that bacteria were the only group responsible for
the oxidation of ammonia. However, recently, a new strain of archaea bearing a putative …

Aerobic nitrous oxide production through N-nitrosating hybrid formation in ammonia-oxidizing archaea

M Stieglmeier, M Mooshammer, B Kitzler… - The ISME …, 2014 - academic.oup.com
Soil emissions are largely responsible for the increase of the potent greenhouse gas nitrous
oxide (N2O) in the atmosphere and are generally attributed to the activity of nitrifying and …

Nitrososphaera viennensis gen. nov., sp. nov., an aerobic and mesophilic, ammonia-oxidizing archaeon from soil and a member of the archaeal phylum …

M Stieglmeier, A Klingl, RJE Alves… - … of Systematic and …, 2014 - microbiologyresearch.org
A mesophilic, neutrophilic and aerobic, ammonia-oxidizing archaeon, strain EN76T, was
isolated from garden soil in Vienna (Austria). Cells were irregular cocci with a diameter of …

Seasonality and resource availability control bacterial and archaeal communities in soils of a temperate beech forest

F Rasche, D Knapp, C Kaiser, M Koranda… - The ISME …, 2011 - academic.oup.com
It was hypothesized that seasonality and resource availability altered through tree girdling
were major determinants of the phylogenetic composition of the archaeal and bacterial …

Biochar addition affected the dynamics of ammonia oxidizers and nitrification in microcosms of a coastal alkaline soil

Y Song, X Zhang, B Ma, SX Chang, J Gong - Biology and fertility of soils, 2014 - Springer
Biochar amendments have frequently been reported to alter microbial communities and
biogeochemical processes in soils. However, the impact of biochar application on bacterial …

Drivers of microbial respiration and net N mineralization at the continental scale

BP Colman, JP Schimel - Soil Biology and Biochemistry, 2013 - Elsevier
The dominant pools of C and N in the terrestrial biosphere are in soils, and understanding
what factors control the rates at which these pools cycle is essential in understanding soil …

Ammonia‐oxidizing communities in a highly aerated full‐scale activated sludge bioreactor: betaproteobacterial dynamics and low relative abundance of Crenarchaea

GF Wells, HD Park, CH Yeung… - Environmental …, 2009 - Wiley Online Library
Ammonia‐oxidizing bacteria (AOB) have long been considered key to the removal of
nitrogen in activated sludge bioreactors. Culture‐independent molecular analyses have …

Dynamics and functional relevance of ammonia‐oxidizing archaea in two agricultural soils

K Schauss, A Focks, S Leininger… - Environmental …, 2009 - Wiley Online Library
Crucial steps in geochemical cycles are in many cases performed by more than one group
of microorganisms, but the significance of this functional redundancy with respect to …