Integration of virtual and high-throughput screening

J Bajorath - Nature Reviews Drug Discovery, 2002 - nature.com
High-throughput and virtual screening are important components of modern drug discovery
research. Typically, these screening technologies are considered distinct approaches, as …

Virtual screening methods that complement HTS

FL Stahura, J Bajorath - Combinatorial chemistry & high …, 2004 - ingentaconnect.com
In this review, we discuss a number of computational methods that have been developed or
adapted for molecule classification and virtual screening (VS) of compound databases. In …

SimBoost: a read-across approach for predicting drug–target binding affinities using gradient boosting machines

T He, M Heidemeyer, F Ban, A Cherkasov… - Journal of …, 2017 - Springer
Computational prediction of the interaction between drugs and targets is a standing
challenge in the field of drug discovery. A number of rather accurate predictions were …

Virtual screening workflow development guided by the “receiver operating characteristic” curve approach. Application to high-throughput docking on metabotropic …

N Triballeau, F Acher, I Brabet, JP Pin… - Journal of medicinal …, 2005 - ACS Publications
The “receiver operating characteristic”(ROC) curve method is a well-recognized metric used
as an objective way to evaluate the ability of a given test to discriminate between two …

Classification of kinase inhibitors using a Bayesian model

X Xia, EG Maliski, P Gallant… - Journal of medicinal …, 2004 - ACS Publications
The use of Bayesian statistics to model both general (multifamily) and specific (single-target)
kinase inhibitors is investigated. The approach demonstrates an alternative to current …

Validated QSAR prediction of OH tropospheric degradation of VOCs: splitting into training− test sets and consensus modeling

P Gramatica, P Pilutti, E Papa - Journal of chemical information …, 2004 - ACS Publications
The rate constant for hydroxyl radical tropospheric degradation of 460 heterogeneous
organic compounds is predicted by QSAR modeling. The applied Multiple Linear …

Profiling prediction of kinase inhibitors: toward the virtual assay

B Merget, S Turk, S Eid, F Rippmann… - Journal of medicinal …, 2017 - ACS Publications
Kinome-wide screening would have the advantage of providing structure–activity
relationships against hundreds of targets simultaneously. Here, we report the generation of …

Deep learning enhancing kinome-wide polypharmacology profiling: model construction and experiment validation

X Li, Z Li, X Wu, Z Xiong, T Yang, Z Fu… - Journal of medicinal …, 2019 - ACS Publications
The kinome-wide virtual profiling of small molecules with high-dimensional structure–activity
data is a challenging task in drug discovery. Here, we present a virtual profiling model …

[图书][B] Predicting chemical toxicity and fate

MTD Cronin - 2004 - taylorfrancis.com
Quantitative Structure-Activity Relationships (QSARs) are increasingly used to predict the
harmful effects of chemicals to humans and the environment. The increased use of these …

Design, synthesis, computational and biological evaluation of new anxiolytics

A Geronikaki, E Babaev, J Dearden, W Dehaen… - Bioorganic & medicinal …, 2004 - Elsevier
New anxiolytics have been discovered by prediction of biological activity with computer
programs pass and derek for a heterogeneous set of 5494 highly chemically diverse …