Stochastic models of intracellular transport

PC Bressloff, JM Newby - Reviews of Modern Physics, 2013 - APS
The interior of a living cell is a crowded, heterogenuous, fluctuating environment. Hence, a
major challenge in modeling intracellular transport is to analyze stochastic processes within …

Artificial Brownian motors: Controlling transport on the nanoscale

P Hänggi, F Marchesoni - Reviews of Modern Physics, 2009 - APS
In systems possessing spatial or dynamical symmetry breaking, Brownian motion combined
with unbiased external input signals, deterministic and random alike, can assist directed …

[图书][B] Stochastic processes in cell biology

PC Bressloff - 2014 - Springer
One of the major challenges in modern biology is to understand how the molecular
components of a living cell operate in a highly noisy environment. What are the specific …

Theory of nonequilibrium free energy transduction by molecular machines

AI Brown, DA Sivak - Chemical reviews, 2019 - ACS Publications
Biomolecular machines are protein complexes that convert between different forms of free
energy. They are utilized in nature to accomplish many cellular tasks. As isothermal …

Analytic solution of an active Brownian particle in a harmonic well

M Caraglio, T Franosch - Physical Review Letters, 2022 - APS
We provide an analytical solution for the time-dependent Fokker-Planck equation for a two-
dimensional active Brownian particle trapped in an isotropic harmonic potential. Using the …

Physics of transport and traffic phenomena in biology: from molecular motors and cells to organisms

D Chowdhury, A Schadschneider, K Nishinari - Physics of Life reviews, 2005 - Elsevier
Traffic-like collective movements are observed at almost all levels of biological systems.
Molecular motor proteins like, for example, kinesin and dynein, which are the vehicles of …

Kinesin's network of chemomechanical motor cycles

S Liepelt, R Lipowsky - Physical review letters, 2007 - APS
A general network theory for the molecular motor kinesin is developed that is based on the
distinct chemical states of the motor and on recent observations about its mechanical steps …

Intracellular transport driven by cytoskeletal motors: General mechanisms and defects

C Appert-Rolland, M Ebbinghaus, L Santen - Physics Reports, 2015 - Elsevier
Cells are the elementary units of living organisms, which are able to carry out many vital
functions. These functions rely on active processes on a microscopic scale. Therefore, they …

Emergent spatiotemporal organization in stochastic intracellular transport dynamics

K Joshi, HM York, CS Wright, RR Biswas… - Annual Review of …, 2024 - annualreviews.org
The interior of a living cell is an active, fluctuating, and crowded environment, yet it maintains
a high level of coherent organization. This dichotomy is readily apparent in the intracellular …

Multi-species simple exclusion processes

MJ Simpson, KA Landman, BD Hughes - Physica A: Statistical Mechanics …, 2009 - Elsevier
A motility mechanism based on a simple exclusion process, where the movement of discrete
agents on a lattice is either unbiased (symmetric) or biased (asymmetric) is considered …