A deep learning-based toolkit for 3D nuclei segmentation and quantitative analysis in cellular and tissue context

A Vijayan, TA Mody, Q Yu, A Wolny, L Cerrone… - …, 2024 - journals.biologists.com
We present a new set of computational tools that enable accurate and widely applicable 3D
segmentation of nuclei in various 3D digital organs. We have developed an approach for …

Promoting developmental diversity in a changing world

C Extavour, L Dolan, KE Sears - Development, 2024 - journals.biologists.com
Scanning through early issues of the Journal of Embryology and Experimental Biology (the
previous name for this journal) reveals the diverse range of organisms that were …

Geometric Complexes in Topological Data Analysis

F Roll - 2024 - mediatum.ub.tum.de
We study geometric complexes and their interaction with the persistent homology pipeline.
We generalize a famous result of Rips on the contractibility of Vietoris–Rips complexes, with …