Addressing global ruminant agricultural challenges through understanding the rumen microbiome: past, present, and future

SA Huws, CJ Creevey, LB Oyama, I Mizrahi… - Frontiers in …, 2018 - frontiersin.org
The rumen is a complex ecosystem composed of anaerobic bacteria, protozoa, fungi,
methanogenic archaea and phages. These microbes interact closely to breakdown plant …

The rhizosphere microbiome: significance of plant beneficial, plant pathogenic, and human pathogenic microorganisms

R Mendes, P Garbeva… - FEMS microbiology …, 2013 - academic.oup.com
Microbial communities play a pivotal role in the functioning of plants by influencing their
physiology and development. While many members of the rhizosphere microbiome are …

[PDF][PDF] 根系分泌物介导下植物-土壤-微生物互作关系研究进展与展望

吴林坤, 林向民, 林文雄 - 植物生态学报, 2014 - plant-ecology.com
摘要根系分泌物是植物与土壤进行物质交换和信息传递的重要载体物质, 是植物响应外界胁迫的
重要途径, 是构成植物不同根际微生态特征的关键因素, 也是根际对话的主要调控者 …

Metaproteogenomic analysis of microbial communities in the phyllosphere and rhizosphere of rice

C Knief, N Delmotte, S Chaffron, M Stark… - The ISME …, 2012 - academic.oup.com
The above-and below-ground parts of rice plants create specific habitats for various
microorganisms. In this study, we characterized the phyllosphere and rhizosphere …

Obstacles in continuous cropping: mechanisms and control measures

Z Ma, Z Guan, Q Liu, Y Hu, L Liu, B Wang, L Huang… - Advances in …, 2023 - Elsevier
With the increase in intensive cultivation and long-term monoculture cropping, problems
caused by continuous cropping (CC) have become increasingly prominent in the forms of …

Soil bacterial and fungal community dynamics in relation to Panax notoginseng death rate in a continuous cropping system

L Dong, J Xu, G Feng, X Li, S Chen - Scientific reports, 2016 - nature.com
Notoginseng (Panax notoginseng), a valuable herbal medicine, has high death rates in
continuous cropping systems. Variation in the soil microbial community is considered the …

Microbial genome-enabled insights into plant–microorganism interactions

DS Guttman, AC McHardy, P Schulze-Lefert - Nature Reviews Genetics, 2014 - nature.com
Advances in genome-based studies on plant-associated microorganisms have transformed
our understanding of many plant pathogens and are beginning to greatly widen our …

Metaproteomics: Harnessing the Power of High Performance Mass Spectrometry to Identify the Suite of Proteins That Control Metabolic Activities in Microbial …

RL Hettich, C Pan, K Chourey, RJ Giannone - Analytical chemistry, 2013 - ACS Publications
The availability of extensive genome information for many different microbes, including
unculturable species in mixed communities from environmental samples, has enabled …

Plant-associated fungal communities in the light of meta'omics

D Peršoh - Fungal Diversity, 2015 - Springer
Approaches for the cultivation-independent analysis of microbial communities are
summarized as meta'omics, which predominantly includes metagenomic,-transcriptomic …

Soil acidification in continuously cropped tobacco alters bacterial community structure and diversity via the accumulation of phenolic acids

Y Bai, G Wang, Y Cheng, P Shi, C Yang, H Yang… - Scientific Reports, 2019 - nature.com
Studying the obstacles associated with continuous cropping is necessary for sustainable
agricultural production. Phenolic acids play an important role in continuous cropping …