Comparative analyses of gene co-expression networks: Implementations and applications in the study of evolution

K Ovens, BF Eames, I McQuillan - Frontiers in Genetics, 2021 - frontiersin.org
Similarities and differences in the associations of biological entities among species can
provide us with a better understanding of evolutionary relationships. Often the evolution of …

The application of omics in ruminant production: A review in the tropical and sub-tropical animal production context

DM Ribeiro, AAK Salama, ACM Vitor, A Argüello… - Journal of …, 2020 - Elsevier
The demand for animal products (eg dairy and beef) in tropical regions is expected to
increase in parallel with the public demand for sustainable practices, due to factors such as …

Selection signatures in two oldest Russian native cattle breeds revealed using high-density single nucleotide polymorphism analysis

NA Zinovieva, AV Dotsev, AA Sermyagin… - PLoS …, 2020 - journals.plos.org
Native cattle breeds can carry specific signatures of selection reflecting their adaptation to
the local environmental conditions and response to the breeding strategy used. In this study …

Genetic Architecture of Carcass and Meat Quality Traits in Montana Tropical® Composite Beef Cattle

L Grigoletto, JBS Ferraz, HR Oliveira, JP Eler… - Frontiers in …, 2020 - frontiersin.org
The Montana Tropical® Composite is a recently developed beef cattle population that is
rapidly expanding in Brazil and other tropical countries. This is mainly due to its improved …

Transcriptome analysis in comparing carcass and meat quality traits of Jiaxing Black Pig and Duroc× Duroc× Berkshire× Jiaxing Black Pig crosses

Q Chen, W Zhang, J Cai, Y Ni, L Xiao, J Zhang - Gene, 2022 - Elsevier
This study compares two typical strains: Chinese local excellent meat quality of Jiaxing
Black (JXB) Pig and quadratic crossbred pig strain Duroc× Duroc× Berkshire× Jiaxing Black …

Analysis of the genes controlling three quantitative traits in three diverse plant species reveals the molecular basis of quantitative traits

M Zhang, YH Liu, W Xu, CW Smith, SC Murray… - Scientific Reports, 2020 - nature.com
Most traits of agricultural importance are quantitative traits controlled by numerous genes.
However, it remains unclear about the molecular mechanisms underpinning quantitative …

Key co-expressed genes correlated with blood serum parameters of pigs fed with different fatty acid profile diets

SL Fanalli, JD Gomes, FJ de Novais, IC Gervásio… - Frontiers in …, 2024 - frontiersin.org
This study investigated how gene expression is affected by dietary fatty acids (FA) by using
pigs as a reliable model for studying human diseases that involve lipid metabolism. This …

Integrative analysis between genome-wide association study and expression quantitative trait loci reveals bovine muscle gene expression regulatory polymorphisms …

B Silva-Vignato, ASM Cesar, J Afonso… - Frontiers in …, 2022 - frontiersin.org
Understanding the architecture of gene expression is fundamental to unravel the molecular
mechanisms regulating complex traits in bovine, such as intramuscular fat content (IMF) and …

Expression patterns of housekeeping genes and tissue-specific genes in black goats across multiple tissues

C Qin, D Wang, H Han, Y Cao, X Wang, Z Xuan… - Scientific Reports, 2024 - nature.com
Black goats are a significant meat breed in southern China. To investigate the expression
patterns and biological functions of genes in various tissues of black goats, we analyzed …

[HTML][HTML] Genomic and transcriptomic analyses enable the identification of important genes associated with subcutaneous fat deposition in Holstein cows

H Zhang, S Mi, LF Brito, L Hu, L Wang, L Ma… - Journal of Genetics and …, 2023 - Elsevier
Subcutaneous fat deposition has many important roles in dairy cattle, including
immunological defense and mechanical protection. The main objectives of this study are to …