Regulation of pre-mRNA splicing: roles in physiology and disease, and therapeutic prospects

ME Rogalska, C Vivori, J Valcárcel - Nature Reviews Genetics, 2023 - nature.com
The removal of introns from mRNA precursors and its regulation by alternative splicing are
key for eukaryotic gene expression and cellular function, as evidenced by the numerous …

RNA processing and its regulation: global insights into biological networks

DD Licatalosi, RB Darnell - Nature Reviews Genetics, 2010 - nature.com
In recent years views of eukaryotic gene expression have been transformed by the finding
that enormous diversity can be generated at the RNA level. Advances in technologies for …

[HTML][HTML] RNA-binding proteins in amyotrophic lateral sclerosis

M Zhao, JR Kim, R van Bruggen, J Park - Molecules and cells, 2018 - Elsevier
Significant research efforts are ongoing to elucidate the complex molecular mechanisms
underlying amyotrophic lateral sclerosis (ALS), which may in turn pinpoint potential …

Analysis of CLIP and iCLIP methods for nucleotide-resolution studies of protein-RNA interactions

Y Sugimoto, J König, S Hussain, B Zupan, T Curk… - Genome biology, 2012 - Springer
UV cross-linking and immunoprecipitation (CLIP) and individual-nucleotide resolution CLIP
(iCLIP) are methods to study protein-RNA interactions in untreated cells and tissues. Here …

Quantitative evaluation of all hexamers as exonic splicing elements

S Ke, S Shang, SM Kalachikov, I Morozova… - Genome …, 2011 - genome.cshlp.org
We describe a comprehensive quantitative measure of the splicing impact of a complete set
of RNA 6-mer sequences by deep sequencing successfully spliced transcripts. All 4096 6 …

iCLIP predicts the dual splicing effects of TIA-RNA interactions

Z Wang, M Kayikci, M Briese, K Zarnack… - PLoS …, 2010 - journals.plos.org
The regulation of alternative splicing involves interactions between RNA-binding proteins
and pre-mRNA positions close to the splice sites. T-cell intracellular antigen 1 (TIA1) and …

Control of alternative splicing in immune responses: many regulators, many predictions, much still to learn

NM Martinez, KW Lynch - Immunological reviews, 2013 - Wiley Online Library
Most mammalian pre‐mRNA s are alternatively spliced in a manner that alters the resulting
open reading frame. Consequently, alternative pre‐mRNA splicing provides an important …

Regulation of protein stability by GSK3 mediated phosphorylation

C Xu, NG Kim, BM Gumbiner - Cell cycle, 2009 - Taylor & Francis
Glycogen synthase kinase-3 (GSK3) plays important roles in numerous signaling pathways
that regulate a variety of cellular processes including cell proliferation, differentiation …

How to achieve high-level expression of microbial enzymes: strategies and perspectives

L Liu, H Yang, H Shin, RR Chen, J Li, G Du… - …, 2013 - Taylor & Francis
Microbial enzymes have been used in a large number of fields, such as chemical,
agricultural and biopharmaceutical industries. The enzyme production rate and yield are the …

The TIA1 RNA-binding protein family regulates EIF2AK2-mediated stress response and cell cycle progression

C Meyer, A Garzia, M Mazzola, S Gerstberger… - Molecular cell, 2018 - cell.com
TIA1 and TIAL1 encode a family of U-rich element mRNA-binding proteins ubiquitously
expressed and conserved in metazoans. Using PAR-CLIP, we determined that both proteins …