Deep-learning method for data association in particle tracking

Y Yao, I Smal, I Grigoriev, A Akhmanova… - …, 2020 - academic.oup.com
Motivation Biological studies of dynamic processes in living cells often require accurate
particle tracking as a first step toward quantitative analysis. Although many particle tracking …

Deep probabilistic tracking of particles in fluorescence microscopy images

R Spilger, JY Lee, VO Chagin, L Schermelleh… - Medical image …, 2021 - Elsevier
Tracking of particles in temporal fluorescence microscopy image sequences is of
fundamental importance to quantify dynamic processes of intracellular structures as well as …

Discovering interpretable models of scientific image data with deep learning

CJ Soelistyo, AR Lowe - … of the IEEE/CVF Conference on …, 2024 - openaccess.thecvf.com
In this study we demonstrate the possibility of finding interpretable domain-appropriate
models of biological images and propose that such a strategy can be used to derive …

Regulated Behavior in Living Cells with Highly Aligned Configurations on Nanowrinkled Graphene Oxide Substrates: Deep Learning Based on Interplay of Cellular …

R Park, MS Kang, G Heo, YC Shin, DW Han… - ACS nano, 2023 - ACS Publications
Micro-/nanotopographical cues have emerged as a practical and promising strategy for
controlling cell fate and reprogramming, which play a key role as biophysical regulators in …

Translation of cellular protein localization using convolutional networks

K Shigene, Y Hiasa, Y Otake, M Soufi… - Frontiers in Cell and …, 2021 - frontiersin.org
Protein localization in cells has been analyzed by fluorescent labeling using indirect
immunofluorescence and fluorescent protein tagging. However, the relationships between …

Graph Network-Based Simulation of Multicellular Dynamics Driven by Concentrated Polymer Brush-Modified Cellulose Nanofibers

C Yoshikawa, DA Nguyen… - ACS Biomaterials …, 2024 - ACS Publications
Manipulating the three-dimensional (3D) structures of cells is important for facilitating to
repair or regenerate tissues. A self-assembly system of cells with cellulose nanofibers …

Studying the wound healing property of biologically and chemically synthesized gold nanoparticles through scratch assay and neural network modeling

AS Desai, A Ashok, SA Wagle, N Bhagat… - … Composites and Hybrid …, 2025 - Springer
Abstract Gold nanoparticles (Au NPs) are commonly used as anti-haemorrhagic and
antiseptic agents. Thus, their cytotoxicity should be studied before application. In this study …

Accelerating the experimental responses on cell behaviors: a long-term prediction of cell trajectories using Social Generative Adversarial Network

MC Comes, J Filippi, A Mencattini, F Corsi, P Casti… - Scientific Reports, 2020 - nature.com
The incremented uptake provided by time-lapse microscopy in Organ-on-a-Chip (OoC)
devices allowed increased attention to the dynamics of the co-cultured systems. However …

Direct cell counting using macro-scale smartphone images of cell aggregates

C Imashiro, Y Tokuoka, K Kikuhara, TG Yamada… - IEEE …, 2020 - ieeexplore.ieee.org
The field of bioengineering depends on technologies for stable cell culture. Conventionally,
every process involved in cell culture has been performed manually, so the culture efficiency …

Development of non-bias phenotypic drug screening for cardiomyocyte hypertrophy by image segmentation using deep learning

J Komuro, Y Tokuoka, T Seki, D Kusumoto… - Biochemical and …, 2022 - Elsevier
The number of patients with heart failure and related deaths is rapidly increasing worldwide,
making it a major problem. Cardiac hypertrophy is a crucial preliminary step in heart failure …