Recommendations for performing, interpreting and reporting hydrogen deuterium exchange mass spectrometry (HDX-MS) experiments

GR Masson, JE Burke, NG Ahn, GS Anand… - Nature …, 2019 - nature.com
Hydrogen deuterium exchange mass spectrometry (HDX-MS) is a powerful biophysical
technique being increasingly applied to a wide variety of problems. As the HDX-MS …

Hydrogen exchange mass spectrometry for studying protein structure and dynamics

L Konermann, J Pan, YH Liu - Chemical Society Reviews, 2011 - pubs.rsc.org
Hydrogen/deuterium exchange (HDX) mass spectrometry (MS) has become a key technique
for monitoring structural and dynamic aspects of proteins in solution. This approach relies on …

Advances in hydrogen/deuterium exchange mass spectrometry and the pursuit of challenging biological systems

EI James, TA Murphree, C Vorauer, JR Engen… - Chemical …, 2021 - ACS Publications
Solution-phase hydrogen/deuterium exchange (HDX) coupled to mass spectrometry (MS) is
a widespread tool for structural analysis across academia and the biopharmaceutical …

Analysis of overlapped and noisy hydrogen/deuterium exchange mass spectra

M Guttman, DD Weis, JR Engen… - Journal of the American …, 2013 - ACS Publications
Noisy and overlapped mass spectrometry data hinder the sequence coverage that can be
obtained from hydrogen deuterium exchange analysis, and places a limit on the complexity …

Probing protein interactions with hydrogen/deuterium exchange and mass spectrometry—a review

AJ Percy, M Rey, KM Burns, DC Schriemer - Analytica chimica acta, 2012 - Elsevier
Assessing the functional outcome of protein interactions in structural terms is a goal of
structural biology, however most techniques have a limited capacity for making structure …

Reliable identification of significant differences in differential hydrogen exchange-mass spectrometry measurements using a hybrid significance testing approach

TS Hageman, DD Weis - Analytical chemistry, 2019 - ACS Publications
Differential hydrogen exchange-mass spectrometry (HX-MS) measurements are valuable for
identification of differences in the higher order structures of proteins. Typically, the data sets …

HDX-MS: an analytical tool to capture protein motion in action

D Narang, C Lento, D J. Wilson - Biomedicines, 2020 - mdpi.com
Virtually all protein functions in the cell, including pathogenic processes, require coordinated
motion of atoms or domains, ie, conformational dynamics. Understanding protein dynamics …

Hydrogen-deuterium exchange mass spectrometry: A novel structural biology approach to structure, dynamics and interactions of proteins and their complexes

O Ozohanics, A Ambrus - Life, 2020 - mdpi.com
Hydrogen/Deuterium eXchange Mass Spectrometry (HDX-MS) is a rapidly evolving
technique for analyzing structural features and dynamic properties of proteins. It may stand …

Discovery and characterization of the laulimalide-microtubule binding mode by mass shift perturbation mapping

MJ Bennett, K Barakat, JT Huzil, J Tuszynski… - Chemistry & biology, 2010 - cell.com
Conventional approaches to site mapping have so far failed to identify the laulimalide
binding site on microtubules. Using mass shift perturbation analysis and data-directed …

Conformational-sensitive fast photochemical oxidation of proteins and mass spectrometry characterize amyloid beta 1–42 aggregation

KS Li, DL Rempel, ML Gross - Journal of the American Chemical …, 2016 - ACS Publications
Preventing and treating Alzheimer's disease require understanding the aggregation of
amyloid beta 1–42 (Aβ1–42) to give oligomers, protofibrils, and fibrils. Here we describe …