Noncoding RNAs link metabolic reprogramming to immune microenvironment in cancers

Y Zhang, Q Mao, Q Xia, J Cheng, Z Huang, Y Li… - Journal of hematology & …, 2021 - Springer
Altered metabolic patterns in tumor cells not only meet their own growth requirements but
also shape an immunosuppressive microenvironment through multiple mechanisms …

On the origin of ATP synthesis in cancer

TN Seyfried, G Arismendi-Morillo, P Mukherjee… - Iscience, 2020 - cell.com
ATP is required for mammalian cells to remain viable and to perform genetically
programmed functions. Maintenance of the ΔG′ ATP hydrolysis of− 56 kJ/mole is the …

Quantitative modelling of amino acid transport and homeostasis in mammalian cells

G Gauthier-Coles, J Vennitti, Z Zhang… - Nature …, 2021 - nature.com
Homeostasis is one of the fundamental concepts in physiology. Despite remarkable
progress in our molecular understanding of amino acid transport, metabolism and signaling …

Nanoengineered sonosensitive platelets for synergistically augmented sonodynamic tumor therapy by glutamine deprivation and cascading thrombosis

L Zhou, W Feng, Y Mao, Y Chen, X Zhang - Bioactive Materials, 2023 - Elsevier
Ultrasound (US)-activated sonodynamic therapy (SDT) stands for a distinct antitumor
modality because of its attractive characteristics including intriguing noninvasiveness …

Bisphenol F induces liver-gut alteration in zebrafish

H Wang, S Qi, X Mu, L Yuan, Y Li, J Qiu - Science of The Total Environment, 2022 - Elsevier
The unease of consumers with bisphenol A has led to the increased industrial usage of
bisphenol F (BPF), which is a new hazard to environmental health. Here, zebrafish were …

Inferring mitochondrial and cytosolic metabolism by coupling isotope tracing and deconvolution

A Stern, M Fokra, B Sarvin, AA Alrahem… - Nature …, 2023 - nature.com
The inability to inspect metabolic activities within distinct subcellular compartments has been
a major barrier to our understanding of eukaryotic cell metabolism. Previous work addressed …

Targeting tumour metabolism in melanoma to enhance response to immune checkpoint inhibition: A balancing act

JF Tiersma, B Evers, BM Bakker, DJ Reijngoud… - Cancer Treatment …, 2024 - Elsevier
Immune checkpoint inhibition has transformed the treatment landscape of advanced
melanoma and long-term survival of patients is now possible. However, at least half of the …

Artificial neural networks enable genome-scale simulations of intracellular signaling

A Nilsson, JM Peters, N Meimetis, B Bryson… - Nature …, 2022 - nature.com
Mammalian cells adapt their functional state in response to external signals in form of
ligands that bind receptors on the cell-surface. Mechanistically, this involves signal …

[HTML][HTML] Advances in flux balance analysis by integrating machine learning and mechanism-based models

A Sahu, MA Blätke, JJ Szymański, N Töpfer - Computational and structural …, 2021 - Elsevier
The availability of multi-omics data sets and genome-scale metabolic models for various
organisms provide a platform for modeling and analyzing genotype-to-phenotype …

Glutamine addiction in tumor cell: Oncogene regulation and clinical treatment

X Li, X Peng, Y Li, S Wei, G He, J Liu, X Li… - Cell Communication and …, 2024 - Springer
After undergoing metabolic reprogramming, tumor cells consume additional glutamine to
produce amino acids, nucleotides, fatty acids, and other substances to facilitate their …