Surface biology of DNA by atomic force microscopy

HG Hansma - Annual review of physical chemistry, 2001 - annualreviews.org
▪ Abstract The atomic force microscope operates on surfaces. Since surfaces occupy much
of the space in living organisms, surface biology is a valid and valuable form of biology that …

DNA studies using atomic force microscopy: capabilities for measurement of short DNA fragments

D Pang, AR Thierry, A Dritschilo - Frontiers in molecular biosciences, 2015 - frontiersin.org
Short DNA fragments, resulting from ionizing radiation induced DNA double strand breaks
(DSBs), or released from cells as a result of physiological processes and circulating in the …

Targeted protein functionalization using His-tags

GD Meredith, HY Wu, NL Allbritton - Bioconjugate chemistry, 2004 - ACS Publications
With the impressive growth in gene sequence data that has become available, recombinant
proteins represent an increasingly vast source of molecular components, with unique …

DNA and the origins of life in micaceous clay

HG Hansma - Biophysical Journal, 2022 - cell.com
Reproducible imaging of DNA by atomic force microscopy was a useful predecessor to Ned
Seeman's DNA nanotechnology. Many of the products of DNA nanotechnology were imaged …

Nickel-guanine interactions in DNA: crystal structure of nickel-d[CGTGTACACG]2

NG Abrescia, T Huynh-Dinh, JA Subirana - JBIC Journal of Biological …, 2002 - Springer
The aim of this study was to clarify whether Ni 2+ ions could bind to guanine bases in a
standard B-DNA duplex and eventually induce a B→ Z transition. We have determined by X …

[HTML][HTML] DNA-binding proteins studied by mechanical manipulation and AFM imaging of single DNA molecules

X Zhao, XP Liu, J Yan - Biophysics Reports, 2022 - ncbi.nlm.nih.gov
The functions of DNA-binding proteins are dependent on protein-induced DNA distortion,
the binding preference to special sequences, DNA secondary structures, the binding kinetics …

Practical Guide to Single-Protein AFM Nanomechanical Spectroscopy Mapping: Insights and Pitfalls As Unraveled by All-Atom MD Simulations on Immunoglobulin G

JG Vilhena, M Ortega, MR Uhlig, R Garcia… - ACS sensors, 2021 - ACS Publications
Atomic force microscopy is an invaluable characterization tool in almost every biophysics
laboratory. However, obtaining atomic/sub-nanometer resolution on single proteins has thus …

Methods for biological probe microscopy in aqueous fluids

JH Kindt, JC Sitko, LI Pietrasanta, E Oroudjev… - Methods in Cell …, 2002 - Elsevier
It is easier and often faster to image biological samples in air than in aqueous fluid. But
imaging in aqueous fluids is almost always preferable if one wants to see biomaterials in …

Атомно-силовая микроскопия: от визуализации молекул ДНК и белков до измерения силы межмолекулярных взаимодействий

АП Лиманский - Успехи современной биологии, 2003 - elibrary.ru
Проанализированы достижения современной нанобиологии в исследовании
единичных молекул нуклеиновых кислот, а также их комплексов с гистоновыми белками …

Imaging of T7 RNA polymerase elongation complexes by atomic force microscopy

OY Limanskaya, AP Limanskii - Molecular Biology, 2008 - Springer
Atomic force microscopy was used to visualize the complexes of bacteriophage T7 RNA
polymerase (RNAP) with a DNA template during transcription. A 1414-bp fragment of …