Metabolomics and complementary techniques to investigate the plant phytochemical cosmos

H Tsugawa, A Rai, K Saito, R Nakabayashi - Natural Product Reports, 2021 - pubs.rsc.org
Covering: up to 2021 Plants and their associated microbial communities are known to
produce millions of metabolites, a majority of which are still not characterized and are …

Systematic multi-omics integration (MOI) approach in plant systems biology

IN Jamil, J Remali, KA Azizan… - Frontiers in plant …, 2020 - frontiersin.org
Across all facets of biology, the rapid progress in high-throughput data generation has
enabled us to perform multi-omics systems biology research. Transcriptomics, proteomics …

Chromosome-level genome assembly of Ophiorrhiza pumila reveals the evolution of camptothecin biosynthesis

A Rai, H Hirakawa, R Nakabayashi, S Kikuchi… - Nature …, 2021 - nature.com
Plant genomes remain highly fragmented and are often characterized by hundreds to
thousands of assembly gaps. Here, we report chromosome-level reference and phased …

Unsupervised and semi‐supervised learning: The next frontier in machine learning for plant systems biology

J Yan, X Wang - The Plant Journal, 2022 - Wiley Online Library
Advances in high‐throughput omics technologies are leading plant biology research into the
era of big data. Machine learning (ML) performs an important role in plant systems biology …

Soil salinity, a serious environmental issue and plant responses: A metabolomics perspective

KH Chele, MM Tinte, LA Piater, IA Dubery… - Metabolites, 2021 - mdpi.com
The effects of global warming have increasingly led to devastating environmental stresses,
such as heat, salinity, and drought. Soil salinization is a serious environmental issue and …

[HTML][HTML] Integrative approaches to abiotic stress management in crops: combining bioinformatics educational tools and artificial intelligence applications

X Zhang, Z Ibrahim, MB Khaskheli, H Raza, F Zhou… - Sustainability, 2024 - mdpi.com
Abiotic stresses, including drought, salinity, extreme temperatures and nutrient deficiencies,
pose significant challenges to crop production and global food security. To combat these …

Herbgenomics: decipher molecular genetics of medicinal plants

W Sun, Z Xu, C Song, S Chen - The Innovation, 2022 - cell.com
* Correspondence: slchen@ icmm. ac. cn Received: June 22, 2022; Accepted: September 9,
2022; Published Online: September 14, 2022; https://doi. org/10.1016/j. xinn. 2022.100322© …

A review of artificial intelligence-assisted omics techniques in plant defense: current trends and future directions

S Murmu, D Sinha, H Chaurasia, S Sharma… - Frontiers in Plant …, 2024 - frontiersin.org
Plants intricately deploy defense systems to counter diverse biotic and abiotic stresses.
Omics technologies, spanning genomics, transcriptomics, proteomics, and metabolomics …

Molecular breeding and the impacts of some important genes families on agronomic traits, a review

MH Shahrajabian, W Sun, Q Cheng - Genetic Resources and Crop …, 2021 - Springer
Gene identification and evolution and also their impacts on agronomical traits are important
variations between related species which are often because of differences in the cumulative …

Engineering insect resistance using plant specialized metabolites

S Zhou, G Jander - Current Opinion in Biotechnology, 2021 - Elsevier
Highlights•Plant chemical defenses provide effective protection against non-specialist
herbivores.•Genetic engineering can lead to the production of novel chemical defenses and …