Unlocking the barley genome by chromosomal and comparative genomics

KFX Mayer, M Martis, PE Hedley, H Šimková… - The Plant …, 2011 - academic.oup.com
We used a novel approach that incorporated chromosome sorting, next-generation
sequencing, array hybridization, and systematic exploitation of conserved synteny with …

Genome interplay in the grain transcriptome of hexaploid bread wheat

M Pfeifer, KG Kugler, SR Sandve, B Zhan, H Rudi… - Science, 2014 - science.org
Allohexaploid bread wheat (Triticum aestivum L.) provides approximately 20% of calories
consumed by humans. Lack of genome sequence for the three homeologous and highly …

Identification and characterization of shared duplications between rice and wheat provide new insight into grass genome evolution

J Salse, S Bolot, M Throude, V Jouffe, B Piegu… - The Plant …, 2008 - academic.oup.com
The grass family comprises the most important cereal crops and is a good system for
studying, with comparative genomics, mechanisms of evolution, speciation, and …

A chromosome bin map of 16,000 expressed sequence tag loci and distribution of genes among the three genomes of polyploid wheat

LL Qi, B Echalier, S Chao, GR Lazo, GE Butler… - Genetics, 2004 - academic.oup.com
Because of the huge size of the common wheat (Triticum aestivum L., 2 n= 6 x= 42,
AABBDD) genome of 17,300 Mb, sequencing and mapping of the expressed portion is a …

Molecular detection of genomic regions associated with grain yield and yield-related components in an elite bread wheat cross evaluated under irrigated and rainfed …

CL McIntyre, KL Mathews, A Rattey… - Theoretical and Applied …, 2010 - Springer
Grain yield and grain weight of wheat are often decreased by water-limitation in the north-
eastern cropping belt of Australia. Based on knowledge that CIMMYT lines are well-adapted …

Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes

ED Akhunov, AR Akhunova, OD Anderson… - BMC genomics, 2010 - Springer
Background A genome-wide assessment of nucleotide diversity in a polyploid species must
minimize the inclusion of homoeologous sequences into diversity estimates and reliably …

Characterization of EST-derived microsatellites in the wheat genome and development of eSSR markers

JH Peng, NLV Lapitan - Functional & integrative genomics, 2005 - Springer
EST-derived microsatellites or simple sequence repeats (eSSR) occur in expressed
sequence tags (EST). Here we report characteristics of eSSRs in the wheat genome …

Molecular mapping of stripe rust resistance gene Yr51 in chromosome 4AL of wheat

M Randhawa, U Bansal, M Valárik, B Klocová… - Theoretical and Applied …, 2014 - Springer
Key message This manuscript describes the chromosomal location of a new source of stripe
rust resistance in wheat. DNA markers closely linked with the resistance locus were …

An ALMT1 Gene Cluster Controlling Aluminum Tolerance at the Alt4 Locus of Rye (Secale cereale L.)

NC Collins, NJ Shirley, M Saeed, M Pallotta… - Genetics, 2008 - academic.oup.com
Aluminum toxicity is a major problem in agriculture worldwide. Among the cultivated
Triticeae, rye (Secale cereale L.) is one of the most Al tolerant and represents an important …

Fine mapping Fhb4, a major QTL conditioning resistance to Fusarium infection in bread wheat (Triticum aestivum L.)

S Xue, G Li, H Jia, F Xu, F Lin, M Tang, Y Wang… - Theoretical and Applied …, 2010 - Springer
Qfhi. nau-4B is a major quantitative trait locus (QTL) against Fusarium graminearum
infection identified in the Fusarium head blight-resistant germplasm Wangshuibai. To fine …