A survey of graph layout problems

J Díaz, J Petit, M Serna - ACM Computing Surveys (CSUR), 2002 - dl.acm.org
Graph layout problems are a particular class of combinatorial optimization problems whose
goal is to find a linear layout of an input graph in such way that a certain objective cost is …

[PDF][PDF] Various properties of various ultrafilters, various graph width parameters, and various connectivity systems

T Fujita - arXiv preprint arXiv, 2024 - researchgate.net
This paper investigates ultrafilters in the context of connectivity systems, defined as pairs (X,
f) where X is a finite set and f is a symmetric submodular function. Ultrafilters, essential in …

[PDF][PDF] A brief overview of applications of tree-width and other graph width parameters

T Fujita - preprint (researchgate), 2024 - researchgate.net
Graph theory, a fundamental branch of mathematics, centers on the study of networks
composed of vertices (nodes) and edges, examining their paths, structures, and properties …

Fixed-parameter tractability and completeness I: Basic results

RG Downey, MR Fellows - SIAM Journal on computing, 1995 - SIAM
For many fixed-parameter problems that are trivially soluable in polynomial time, such as (k-)
DOMINATING SET, essentially no better algorithm is presently known than the one which …

[图书][B] Topics in intersection graph theory

TA McKee, FR McMorris - 1999 - SIAM
Intersection graphs provide theory to underlie much of graph theory. They epitomize graph-
theoretic structure and have their own distinctive concepts and emphasis. They subsume …

[PDF][PDF] Parameterized complexity: A framework for systematically confronting computational intractability

RG Downey, MR Fellows, U Stege - Contemporary Trends in …, 1997 - researchgate.net
In this paper we give a programmatic overview of parameterized computational complexity
in the broad context of the problem of coping with computational intractability. We give some …

Four strikes against physical mapping of DNA

PW Goldberg, MC Golumbic, H Kaplan… - Journal of …, 1995 - liebertpub.com
Physical mapping is a central problem in molecular biology and the human genome project.
The problem is to reconstruct the relative position of fragments of DNA along the genome …

Fixed-parameter tractability and completeness IV: On completeness for W [P] and PSPACE analogues

KA Abrahamson, RG Downey, MR Fellows - Annals of pure and applied …, 1995 - Elsevier
We describe new results in parametrized complexity theory. In particular, we prove a number
of concrete hardness results for W [P], the top level of the hardness hierarchy introduced by …

Advice classes of parameterized tractability

L Cai, J Chen, RG Downey, MR Fellows - Annals of pure and applied logic, 1997 - Elsevier
Many natural computational problems have input consisting of two or more parts, one of
which may be considered a parameter. For example, there are many problems for which the …

Pathwidth, bandwidth, and completion problems to proper interval graphs with small cliques

H Kaplan, R Shamir - SIAM Journal on Computing, 1996 - SIAM
We study two related problems motivated by molecular biology.• Given a graph G and a
constant k, does there exist a supergraph G' of G that is a unit interval graph and has clique …