EasySSR: a user-friendly web application with full command-line features for large-scale batch microsatellite mining and samples comparison
SIA Alves, VBC Ferreira, CWD Dantas, ALC Silva… - Frontiers in …, 2023 - frontiersin.org
Microsatellites, also known as SSRs or STRs, are polymorphic DNA regions with tandem
repetitions of a nucleotide motif of size 1–6 base pairs with a broad range of applications in …
repetitions of a nucleotide motif of size 1–6 base pairs with a broad range of applications in …
Evaluating the transmission feasibility of SARS-CoV-2 Omicron (B. 1.1. 529) variant to 143 mammalian hosts: insights from S protein RBD and host ACE2 interaction …
In comparison to previously known severe respiratory syndrome coronavirus 2 (SARS-CoV-
2) variants, the newly emerged Omicron (B. 1.1. 529) variant shows higher infectivity in …
2) variants, the newly emerged Omicron (B. 1.1. 529) variant shows higher infectivity in …
Microsatellite signature analysis of twenty-one virophage genomes of the family Lavidaviridae
Abstract Microsatellites or Simple Sequence Repeats (SSRs) are short motif repeat
sequences constituting the most hypervariable regions of genomes. Present study extracts …
sequences constituting the most hypervariable regions of genomes. Present study extracts …
Systems biology of the genomes' microsatellite signature of Orthopoxvirus including the Monkeypox virus
This study is an attempt to extract and analyse the microsatellites or simple sequence
repeats (SSRs) from the genomes of eight species of the genus Orthopoxvirus. The average …
repeats (SSRs) from the genomes of eight species of the genus Orthopoxvirus. The average …
Two short Low complexity regions (LCRs) are hallmark sequences of the Delta SARS-CoV-2 variant spike protein
A Becerra, I Muñoz-Velasco, A Aguilar-Cámara… - Scientific reports, 2022 - nature.com
Low complexity regions (LCRs) are protein sequences formed by a set of compositionally
biased residues. LCRs are extremely abundant in cellular proteins and have also been …
biased residues. LCRs are extremely abundant in cellular proteins and have also been …
Assessment of simple sequence repeats signature in hepatitis E virus (HEV) genomes
Abstract Background Hepatitis E virus (HEV) is small (27–34 nm diameter) non-enveloped
with positive sense ssRNA genome. Microsatellites or simple sequence repeats (SSR) are …
with positive sense ssRNA genome. Microsatellites or simple sequence repeats (SSR) are …
Microsatellite signature of reference genome sequence of SARS-CoV-2 and 32 species of Coronaviridae family
Background: Simple sequence repeats (SSRs) are 1-6 bp repeat motif sequences present
across both prokaryotic and eukaryotic genomes with various clinical implications besides …
across both prokaryotic and eukaryotic genomes with various clinical implications besides …
Microsatellite diversity and complexity in the viral genomes of the family Caliciviridae
Background Microsatellites or simple sequence repeats (SSR) consist of 1–6 nucleotide
motifs of DNA or RNA which are ubiquitously present in tandem repeated sequences across …
motifs of DNA or RNA which are ubiquitously present in tandem repeated sequences across …
Role jaderných laminů a Nup358 v infekci polyomavirem BK
L Išler - 2023 - dspace.cuni.cz
Lidský polyomavirus BK (BKPyV) již dlouhá desetiletí způsobuje závažné zdravotní
komplikace zejména imunokompromitovaným jedincům. Cílem této práce se bylo zaměřit …
komplikace zejména imunokompromitovaným jedincům. Cílem této práce se bylo zaměřit …