Mechanisms of damage to DNA labeled with electrophilic nucleobases induced by ionizing or UV radiation

J Rak, L Chomicz, J Wiczk, K Westphal… - The Journal of …, 2015 - ACS Publications
Hypoxia a hallmark of solid tumors makes hypoxic cells radioresistant. On the other
hand, DNA, the main target of anticancer therapy, is not sensitive to the near UV photons …

How to find out whether a 5-substituted uracil could be a potential DNA radiosensitizer

L Chomicz, M Zdrowowicz… - The Journal of …, 2013 - ACS Publications
Incorporated into genomic DNA, 5-substituted uracils could be employed in human cancer
radiotherapy if they could be sensitized to dissociate upon reaction with hydrated electrons …

Ionization and electron attachment for nucleobases in water

Y Zhang, P Xie, S Yang, K Han - The Journal of Physical …, 2019 - ACS Publications
We used a combined quantum mechanical/mechanical molecular (QM/MM) method to
investigate ionization and electron attachment for nucleobases in water. We first explored …

Nitro rotation tuned dissociative electron attachment upon targeted radiosensitizer 4-substituted Z bases

X Cui, Y Zhao, C Zhang, Q Meng - Physical Chemistry Chemical …, 2022 - pubs.rsc.org
In this work, a set of new potential radiation sensitizers (4-substituted Z-bases: 4XZ, X= F, Cl,
Br, and I) are designed based on the artificial 6-amino-5-nitro-3-(1′-β-D-2 …

Is uracil aromatic? The enthalpies of hydrogenation in the gaseous and crystalline phases, and in aqueous solution, as tools to obtain an answer

TLP Galvao, IM Rocha… - The Journal of …, 2013 - ACS Publications
The enthalpy of hydrogenation of uracil was derived from the experimental enthalpies of
formation, in the gaseous phase, of uracil and 5, 6-dihydrouracil, in order to analyze its …

Uracil–water interaction revisited–in search of single H-bonded secondary minima

A Buczek, K Rzepiela, T Kupka, MA Broda… - Physical Chemistry …, 2024 - pubs.rsc.org
Monohydrated uracil (UW) complexes are stabilized by both O⋯ HO and NH⋯ O hydrogen
bonds (H-bonds), simultaneously participating in forming three stable cyclic structures. The …

Nanohydration of uracil: emergence of three-dimensional structures and proton-induced charge transfer

MC Bacchus-Montabonel, F Calvo - Physical Chemistry Chemical …, 2015 - pubs.rsc.org
Stepwise hydration of uracil has been theoretically revisited using different methods ranging
from classical force fields to quantum chemical approaches. Hydration initially begins within …

Insights into the one-electron reduction behavior of tetrachloro-o-benzoquinone: A DFT and molecular dynamics study

C Guo, W Wang, W Feng, P Li - RSC advances, 2017 - pubs.rsc.org
In this study, the one-electron reduction behavior of tetrachloro-o-benzoquinone (o-TCBQ)
has been systematically investigated at the B3LYP/6-311++ G** level of theory in …

Quantum-chemical studies of the consequences of one-electron oxidation and one-electron reduction for imidazole in the gas phase and water

ED Raczyńska - Computational and Theoretical Chemistry, 2012 - Elsevier
Consequences of one-electron oxidation and one-electron reduction were studied for
imidazole (I) in the gas phase and in water (apolar and polar environment, respectively) …

Insights into the Mechanism of the Reaction between Tetrachloro‐p‐Benzoquinone and Hydrogen Peroxide and their Implications in the Catalytic Role of Water …

P Li, W Wang, Q Sun, Z Li, A Du, S Bi… - ChemPhysChem, 2013 - Wiley Online Library
Detailed mechanisms for the formation of hydroxyl or alkoxyl radicals in the reactions
between tetrachloro‐p‐benzoquinone (TCBQ) and organic hydroperoxides are crucial for …