Missing value imputation for gene expression data: computational techniques to recover missing data from available information

AWC Liew, NF Law, H Yan - Briefings in bioinformatics, 2011 - academic.oup.com
Microarray gene expression data generally suffers from missing value problem due to a
variety of experimental reasons. Since the missing data points can adversely affect …

[图书][B] Gene expression studies using Affymetrix microarrays

H Gohlmann, W Talloen - 2009 - taylorfrancis.com
The Affymetrix GeneChip system is one of the most widely adapted microarray platforms.
However, due to the overwhelming amount of information available, many Affymetrix users …

[HTML][HTML] A biclustering algorithm based on a bicluster enumeration tree: application to dna microarray data

W Ayadi, M Elloumi, JK Hao - BioData mining, 2009 - Springer
Background In a number of domains, like in DNA microarray data analysis, we need to
cluster simultaneously rows (genes) and columns (conditions) of a data matrix to identify …

Co-clustering through optimal transport

C Laclau, I Redko, B Matei… - … on machine learning, 2017 - proceedings.mlr.press
In this paper, we present a novel method for co-clustering, an unsupervised learning
approach that aims at discovering homogeneous groups of data instances and features by …

Iterative bicluster-based least square framework for estimation of missing values in microarray gene expression data

KO Cheng, NF Law, WC Siu - Pattern recognition, 2012 - Elsevier
DNA microarray experiment inevitably generates gene expression data with missing values.
An important and necessary pre-processing step is thus to impute these missing values …

Bicluster viewer: a visualization tool for analyzing gene expression data

J Heinrich, R Seifert, M Burch, D Weiskopf - Advances in Visual …, 2011 - Springer
Exploring data sets by applying biclustering algorithms was first introduced in gene
expression analysis. While the generated biclustered data grows with increasing rates due …

Understanding road network dynamics: Link-based topological patterns

S Freiria, B Ribeiro, AO Tavares - Journal of transport geography, 2015 - Elsevier
Road network interruptions caused by natural disasters are becoming more frequent and
their consequences are becoming of a wider range. The main goal of this work is to identify …

[HTML][HTML] Furby: fuzzy force-directed bicluster visualization

M Streit, S Gratzl, M Gillhofer, A Mayr, A Mitterecker… - BMC …, 2014 - Springer
Background Cluster analysis is widely used to discover patterns in multi-dimensional data.
Clustered heatmaps are the standard technique for visualizing one-way and two-way …

Automated trading point forecasting based on bicluster mining and fuzzy inference

Q Huang, J Yang, X Feng… - IEEE Transactions on …, 2019 - ieeexplore.ieee.org
Historical financial data are frequently used in technical analysis to identify patterns that can
be exploited to achieve trading profits. Although technical analysis using a variety of …

[HTML][HTML] Pattern-driven neighborhood search for biclustering of microarray data

W Ayadi, M Elloumi, JK Hao - BMC bioinformatics, 2012 - Springer
Background Biclustering aims at finding subgroups of genes that show highly correlated
behaviors across a subgroup of conditions. Biclustering is a very useful tool for mining …