Protein structure-based drug design: from docking to molecular dynamics

P Śledź, A Caflisch - Current opinion in structural biology, 2018 - Elsevier
Highlights•High-throughput docking of small molecules is very successful in hit identification,
particularly for screening mainly rigid fragments.•Classical force fields with implicit solvent …

Molecular dynamics simulations and drug discovery

JD Durrant, JA McCammon - BMC biology, 2011 - Springer
This review discusses the many roles atomistic computer simulations of macromolecular (for
example, protein) receptors and their associated small-molecule ligands can play in drug …

Refined structure of the nicotinic acetylcholine receptor at 4 Å resolution

N Unwin - Journal of molecular biology, 2005 - Elsevier
We present a refined model of the membrane-associated Torpedo acetylcholine (ACh)
receptor at 4Å resolution. An improved experimental density map was obtained from 342 …

Tumor microenvironment‐enabled nanotherapy

L Wang, M Huo, Y Chen, J Shi - Advanced healthcare materials, 2018 - Wiley Online Library
Cancer is now one of the world's leading threats to human health. With the development of
oncology in both biology and biomedicine, it has been demonstrated that abnormal …

Normal mode analysis of biomolecular structures: functional mechanisms of membrane proteins

I Bahar, TR Lezon, A Bakan, IH Shrivastava - Chemical reviews, 2010 - ACS Publications
A polymer chain of N atoms enjoys 3N-6 internal degrees of freedom, which gives rise to
infinitely many conformations. Even a simple model of N) 100 atoms where bond lengths …

The alpha7 nicotinic acetylcholine receptor as a pharmacological target for inflammation

WJ De Jonge, L Ulloa - British journal of pharmacology, 2007 - Wiley Online Library
The physiological regulation of the immune system encompasses comprehensive anti‐
inflammatory mechanisms that can be harnessed for the treatment of infectious and …

Allosteric mechanisms of signal transduction

JP Changeux, SJ Edelstein - Science, 2005 - science.org
Forty years ago, a simple model of allosteric mechanisms (indirect interactions between
distinct sites), used initially to explain feedback-inhibited enzymes, was presented by …

Understanding the bases of function and modulation of α7 nicotinic receptors: implications for drug discovery

J Corradi, C Bouzat - Molecular pharmacology, 2016 - ASPET
The nicotinic acetylcholine receptor (nAChR) belongs to a superfamily of pentameric ligand-
gated ion channels involved in many physiologic and pathologic processes. Among …

The structural basis of function in Cys-loop receptors

AJ Thompson, HA Lester… - Quarterly reviews of …, 2010 - cambridge.org
Cys-loop receptors are membrane-spanning neurotransmitter-gated ion channels that are
responsible for fast excitatory and inhibitory transmission in the peripheral and central …

Cholinergic modulation of neuroinflammation: focus on α7 nicotinic receptor

R Piovesana, MS Salazar Intriago, L Dini… - International journal of …, 2021 - mdpi.com
All nervous system pathologies (eg, neurodegenerative/demyelinating diseases and brain
tumours) develop neuroinflammation, a beneficial process during pathological events …