TCR-engineered T cell therapy in solid tumors: State of the art and perspectives

E Baulu, C Gardet, N Chuvin, S Depil - Science Advances, 2023 - science.org
T cell engineering has changed the landscape of cancer immunotherapy. Chimeric antigen
receptor T cells have demonstrated a remarkable efficacy in the treatment of B cell …

Identification of neoantigens for individualized therapeutic cancer vaccines

F Lang, B Schrörs, M Löwer, Ö Türeci… - Nature reviews Drug …, 2022 - nature.com
Somatic mutations in cancer cells can generate tumour-specific neoepitopes, which are
recognized by autologous T cells in the host. As neoepitopes are not subject to central …

High-throughput and single-cell T cell receptor sequencing technologies

JA Pai, AT Satpathy - Nature methods, 2021 - nature.com
T cells express T cell receptors (TCRs) composed of somatically recombined TCRα and
TCRβ chains, which mediate recognition of major histocompatibility complex (MHC)–antigen …

SARS-CoV-2 genome-wide T cell epitope mapping reveals immunodominance and substantial CD8+ T cell activation in COVID-19 patients

SK Saini, DS Hersby, T Tamhane, HR Povlsen… - Science …, 2021 - science.org
T cells are important for effective viral clearance, elimination of virus-infected cells, and long-
term disease protection. To examine the full spectrum of CD8+ T cell immunity in COVID-19 …

Targeting public neoantigens for cancer immunotherapy

AH Pearlman, MS Hwang, MF Konig, EHC Hsiue… - Nature cancer, 2021 - nature.com
Several current immunotherapy approaches target private neoantigens derived from
mutations that are unique to individual patients' tumors. However, immunotherapeutic …

[HTML][HTML] Antigen dominance hierarchies shape TCF1+ progenitor CD8 T cell phenotypes in tumors

ML Burger, AM Cruz, GE Crossland, G Gaglia… - Cell, 2021 - cell.com
CD8 T cell responses against different tumor neoantigens occur simultaneously, yet little is
known about the interplay between responses and its impact on T cell function and tumor …

[HTML][HTML] Predicting recognition between T cell receptors and epitopes with TCRGP

E Jokinen, J Huuhtanen, S Mustjoki… - PLoS computational …, 2021 - journals.plos.org
Adaptive immune system uses T cell receptors (TCRs) to recognize pathogens and to
consequently initiate immune responses. TCRs can be sequenced from individuals and …

[HTML][HTML] T-Scan: a genome-wide method for the systematic discovery of T cell epitopes

T Kula, MH Dezfulian, CI Wang, NS Abdelfattah… - Cell, 2019 - cell.com
T cell recognition of specific antigens mediates protection from pathogens and controls
neoplasias, but can also cause autoimmunity. Our knowledge of T cell antigens and their …

T cell antigen discovery

AV Joglekar, G Li - Nature methods, 2021 - nature.com
T cells respond to threats in an antigen-specific manner using T cell receptors (TCRs) that
recognize short peptide antigens presented on major histocompatibility complex (MHC) …

[HTML][HTML] Antigen identification and high-throughput interaction mapping by reprogramming viral entry

CS Dobson, AN Reich, S Gaglione, BE Smith, EJ Kim… - Nature …, 2022 - nature.com
Deciphering immune recognition is critical for understanding a broad range of diseases and
for the development of effective vaccines and immunotherapies. Efforts to do so are limited …