Non-additive effects in genomic selection

L Varona, A Legarra, MA Toro, ZG Vitezica - Frontiers in genetics, 2018 - frontiersin.org
In the last decade, genomic selection has become a standard in the genetic evaluation of
livestock populations. However, most procedures for the implementation of genomic …

Applications of population genetics to animal breeding, from Wright, Fisher and Lush to genomic prediction

WG Hill - Genetics, 2014 - academic.oup.com
Although animal breeding was practiced long before the science of genetics and the
relevant disciplines of population and quantitative genetics were known, breeding programs …

nadiv: an R package to create relatedness matrices for estimating non-additive genetic variances in animal models

ME Wolak - Methods in Ecology and Evolution, 2012 - aurora.auburn.edu
1. The Non-Additive InVerses (nadiv) R software package contains functions to create and
use non-additive genetic relationship matrices in the animal model of quantitative genetics …

Genetic analyses of growth, real-time ultrasound, carcass, and pork quality traits in Duroc and Landrace pigs: II. Heritabilities and correlations

LL Lo, DG McLaren, FK McKeith… - Journal of animal …, 1992 - academic.oup.com
Abstract Knowledge of the genetic control of pork quality traits and relationships among pork
quality, growth, and carcass characteristics is required for American swine populations. Data …

One hundred years of statistical developments in animal breeding

D Gianola, GJM Rosa - Annu. Rev. Anim. Biosci., 2015 - annualreviews.org
Statistical methodology has played a key role in scientific animal breeding. Approximately
one hundred years of statistical developments in animal breeding are reviewed. Some of the …

Use of multiple genetic markers in prediction of breeding values.

JA Van Arendonk, B Tier, BP Kinghorn - Genetics, 1994 - academic.oup.com
Genotypes at a marker locus give information on transmission of genes from parents to
offspring and that information can be used in predicting the individuals' additive genetic …

Rapid inversion of dominance relationship matrices for noninbred populations by including sire by dam subclass effects

I Hoeschele, PM VanRaden - Journal of Dairy Science, 1991 - Elsevier
For estimation of dominance effects and dominance variance, the inverse of a dominance
relationship matrix is required. Dominance effects can be partitioned into sire× dam or sire× …

Shared spatial effects on quantitative genetic parameters: accounting for spatial autocorrelation and home range overlap reduces estimates of heritability in wild red …

KV Stopher, CA Walling, A Morris, FE Guinness… - …, 2012 - academic.oup.com
Social structure, limited dispersal, and spatial heterogeneity in resources are ubiquitous in
wild vertebrate populations. As a result, relatives share environments as well as genes, and …

Genetic evaluation methods for populations with dominance and inbreeding

IJM de Boer, I Hoeschele - Theoretical and Applied Genetics, 1993 - Springer
The effect of inbreeding on mean and genetic covariance matrix for a quantitative trait in a
population with additive and dominance effects is shown. This genetic covariance matrix is a …

Nonadditive genetic effects and inbreeding depression for body weight in Atlantic salmon (Salmo salar L.)

M Rye, IL Mao - Livestock Production Science, 1998 - Elsevier
For four sub-populations of Atlantic salmon (Salmo salar) in Norway, additive, dominance
and additive by additive genetic variances and inbreeding depression were estimated for …