Mechanism and function of oxidative reversal of DNA and RNA methylation

L Shen, CX Song, C He, Y Zhang - Annual review of …, 2014 - annualreviews.org
The importance of eukaryotic DNA methylation [5-methylcytosine (5mC)] in transcriptional
regulation and development was first suggested almost 40 years ago. However, the …

Chemical methods for decoding cytosine modifications in DNA

MJ Booth, EA Raiber, S Balasubramanian - Chemical reviews, 2015 - ACS Publications
Genetic information is encoded by the four bases adenine (A), guanine (G), cytosine (C),
and thymine (T). Base pairing through hydrogen bonding between the cognate pairs AT and …

MXene Enhanced Photoactivity of Bi2O3/Bi2S3 Heterojunction with G-wire Superstructure for Photoelectrochemical Detection of TET1 Protein

Y Zheng, X Cui, Y Zhou, H Zhang, L Cao, L Gao… - ACS …, 2022 - ACS Publications
Ten-eleven translocation 1 (TET1) protein has the potential to accelerate the oxygenation of
5-methylcytosine to 5-hydroxymethylcytosine (5hmC); then the− CH2OH of 5hmC can further …

Pain-related stress during the Neonatal Intensive Care Unit stay and SLC6A4 methylation in very preterm infants

L Provenzi, M Fumagalli, I Sirgiovanni… - Frontiers in behavioral …, 2015 - frontiersin.org
Very preterm (VPT) infants need long-lasting hospitalization in the Neonatal Intensive Care
Unit (NICU) during which they are daily exposed to pain-related stress. Alterations of DNA …

A novel electrochemiluminescence biosensor for the detection of 5-methylcytosine, TET 1 protein and β-glucosyltransferase activities based on gold nanoclusters …

W Jiang, H Yin, Y Zhou, J Duan, H Li, M Wang… - Sensors and Actuators B …, 2018 - Elsevier
Methylcytosine (5 mC) is considered to play a key regulating role in gene transcription and
can be oxidized by ten–eleven translocation (TET) dioxygenases to 5 …

Lead exposure induces changes in 5-hydroxymethylcytosine clusters in CpG islands in human embryonic stem cells and umbilical cord blood

A Sen, P Cingolani, MC Senut, S Land… - Epigenetics, 2015 - Taylor & Francis
Prenatal exposure to neurotoxicants such as lead (Pb) may cause stable changes in the
DNA methylation (5mC) profile of the fetal genome. However, few studies have examined its …

NEIL3-dependent regulation of cardiac fibroblast proliferation prevents myocardial rupture

MB Olsen, GA Hildrestrand, K Scheffler, LE Vinge… - Cell reports, 2017 - cell.com
Myocardial infarction (MI) triggers a reparative response involving fibroblast proliferation and
differentiation driving extracellular matrix modulation necessary to form a stabilizing scar …

Epigenetic regulation of genomic imprinting from germ line to preimplantation

WA MacDonald, MRW Mann - Molecular reproduction and …, 2014 - Wiley Online Library
Genomic imprinting is an epigenetic process that distinguishes parental alleles, resulting in
parent‐specific expression of a gene or cluster of genes. Imprints are acquired during …

Integrated analyses of DNA methylation and hydroxymethylation reveal tumor suppressive roles of ECM1, ATF5, and EOMESin human hepatocellular carcinoma

F Gao, Y Xia, J Wang, Z Lin, Y Ou, X Liu, W Liu, B Zhou… - Genome biology, 2014 - Springer
Abstract Background Differences in 5-hydroxymethylcytosine, 5hmC, distributions may
complicate previous observations of abnormal cytosine methylation statuses that are used …

[HTML][HTML] Species-specific rewiring of definitive endoderm developmental gene activation via endogenous retroviruses through TET1-mediated demethylation

F Wu, Z Liufu, Y Liu, L Guo, J Wu, S Cao, Y Qin, N Guo… - Cell Reports, 2022 - cell.com
Transposable elements (TEs) are the major sources of lineage-specific genomic innovation
and comprise nearly half of the human genome, but most of their functions remain unclear …